RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MT-ND3P03897 115 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 HLA-DQB2P05538 268 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 TACR2P21452 398 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 DRD4P21917 467 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 ELF1P32519 619 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 TTC39BQ5VTQ0 682 aaPredicted RBP26.2■■□□□ 1.79
CLK2-201ENST00000355560 NAPEPLDQ6IQ20 393 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 MYEOVQ96EZ4 313 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 TRMT2BQ96GJ1 504 aaKnown RBP26.2■■□□□ 1.79
CLK2-201ENST00000355560 FCRL5Q96RD9 977 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 UGT1A7Q9HAW7 530 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 UGT1A10Q9HAW8 530 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 UGT1A8Q9HAW9 530 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 ZNF212Q9UDV6 495 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 EBAG9O00559 213 aa26.2■■□□□ 1.78
CLK2-201ENST00000355560 CKAP2Q8WWK9 683 aa26.2■■□□□ 1.78
CLK2-201ENST00000355560 TTC17Q96AE7 1141 aa26.2■■□□□ 1.78
CLK2-201ENST00000355560 PCDHB12Q9Y5F1 795 aa26.2■■□□□ 1.78
CLK2-201ENST00000355560 RPS6KL1Q9Y6S9 549 aa26.2■■□□□ 1.78
CLK2-201ENST00000355560 F5H5T6 163 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 KRT37O76014 449 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 MT-CYBP00156 380 aaPredicted RBP26.19■■□□□ 1.78
CLK2-201ENST00000355560 POLBP06746 335 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 HARS2P49590 506 aaKnown RBP26.19■■□□□ 1.78
CLK2-201ENST00000355560 WDR4P57081 412 aaKnown RBP26.19■■□□□ 1.78
CLK2-201ENST00000355560 ZNF354CQ86Y25 554 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 KLHDC8BQ8IXV7 354 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 LRRC34Q8IZ02 419 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 DENND1AQ8TEH3 1009 aa26.19■■□□□ 1.78
CLK2-201ENST00000355560 TEX28O15482 410 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 VIMP08670 466 aaKnown RBP26.18■■□□□ 1.78
CLK2-201ENST00000355560 C16orf59Q7L2K0 433 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 LGI2Q8N0V4 545 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 SERAC1Q96JX3 654 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 PAIP2Q9BPZ3 127 aaKnown RBP26.18■■□□□ 1.78
CLK2-201ENST00000355560 SP110Q9HB58 689 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 INSL5Q9Y5Q6 135 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 PSMD3O43242 534 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 ACSL4O60488 711 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 RAMP2O60895 175 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 ANXA9O76027 345 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 FGF18O76093 207 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 PEX11BO96011 259 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 OR1E1P30953 314 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 CA8P35219 290 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 CES3Q6UWW8 571 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 LINC00523Q86TU6 105 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 TCEAL8Q8IYN2 117 aa26.18■■□□□ 1.78
CLK2-201ENST00000355560 ALKBH8Q96BT7 664 aaKnown RBP26.18■■□□□ 1.78
CLK2-201ENST00000355560 TRIM49D1C9J1S8 452 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 J3KR12 359 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 ASMTLO95671 621 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 SLC6A4P31645 630 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 SLC11A2P49281 568 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 IL9RQ01113 521 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 CDH17Q12864 832 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 FAM133BQ5BKY9 247 aaKnown RBP26.17■■□□□ 1.78
CLK2-201ENST00000355560 CERCAMQ5T4B2 595 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 LGSNQ5TDP6 509 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 RFWD3Q6PCD5 774 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 CDKL2Q92772 493 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.17■■□□□ 1.78
CLK2-201ENST00000355560 C2orf78A6NCI8 922 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 ATP9BO43861 1147 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 SNRPAP09012 282 aaKnown RBP26.17■■□□□ 1.78
CLK2-201ENST00000355560 NIPAL4Q0D2K0 466 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 HNRNPDQ14103 355 aaKnown RBP26.17■■□□□ 1.78
CLK2-201ENST00000355560 POLD3Q15054 466 aaPredicted RBP26.17■■□□□ 1.78
CLK2-201ENST00000355560 SPANXN3Q5MJ09 141 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 DNAJB7Q7Z6W7 309 aaPredicted RBP26.17■■□□□ 1.78
CLK2-201ENST00000355560 DENND1CQ8IV53 801 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 BANPQ8N9N5 519 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 IPMKQ8NFU5 416 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 PSMG2Q969U7 264 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 PLD4Q96BZ4 506 aa26.17■■□□□ 1.78
CLK2-201ENST00000355560 PABPC5Q96DU9 382 aaKnown RBP26.17■■□□□ 1.78
CLK2-201ENST00000355560 ANAPC1Q9H1A4 1944 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 TCP11X1B4DZS4 312 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 KRT38O76015 456 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 MAPKAPK2P49137 400 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 EPHB3P54753 998 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 CFAP52Q8N1V2 620 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 ZNF669Q96BR6 464 aaPredicted RBP26.16■■□□□ 1.78
CLK2-201ENST00000355560 MAGEB18Q96M61 343 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 PPP1R2P1Q96PQ5 205 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 IL22Q9GZX6 179 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 RNF38Q9H0F5 515 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 ZBP1Q9H171 429 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 SLC17A6Q9P2U8 582 aa26.16■■□□□ 1.78
CLK2-201ENST00000355560 AP3B1O00203 1094 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 ZWINTO95229 277 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 TPH1P17752 444 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 NPY2RP49146 381 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 RENBPP51606 427 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 BMPR2Q13873 1038 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 SLC1A5Q15758 541 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 SMAD1Q15797 465 aaKnown RBP26.15■■□□□ 1.78
CLK2-201ENST00000355560 PARP15Q460N3 678 aa26.15■■□□□ 1.78
CLK2-201ENST00000355560 MARK2Q7KZI7 788 aaKnown RBP26.15■■□□□ 1.78
CLK2-201ENST00000355560 FIBCD1Q8N539 461 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms