RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 SEPT5Q99719 369 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 GATA5Q9BWX5 397 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 ATICP31939 592 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 ZNF280AP59817 542 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 PLOD1Q02809 727 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 PCDHAC1Q9H158 963 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 DCDC2Q9UHG0 476 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 ACOT9Q9Y305 439 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 FAM149AA5PLN7 773 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 MAP3K13O43283 966 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 DNAJA2O60884 412 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 ALDOAP04075 364 aaKnown RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 GSTT1P30711 240 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 SEMA5AQ13591 1074 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 TAF1CQ15572 869 aaPredicted RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 CCL14Q16627 93 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 NT5DC4Q86YG4 428 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 MROH8Q9H579 483 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 SLC2A6Q9UGQ3 507 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 CDYLQ9Y232 598 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 CDY2AQ9Y6F7 541 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 OR6B1O95007 311 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 COX4I1P13073 169 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 CD1EP15812 388 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 IL4RP24394 825 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 CCR1P32246 355 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 CLCNKBP51801 687 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 NCBP2-AS2Q69YL0 99 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 DNAJC14Q6Y2X3 702 aaPredicted RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 UTS2BQ765I0 119 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 ZNF513Q8N8E2 541 aaPredicted RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 WNT8BQ93098 351 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 PYGLP06737 847 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 ACADSP16219 412 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 NPR3P17342 541 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 PGAM1P18669 254 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 MATKP42679 507 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 DDR2Q16832 855 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 TRMT5Q32P41 509 aaKnown RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 SV2CQ496J9 727 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 PAOXQ6QHF9 649 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 PLPPR4Q7Z2D5 763 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 TLK2Q86UE8 772 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 OSTM1Q86WC4 334 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 KBTBD2Q8IY47 623 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 MTMR14Q8NCE2 650 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 TMEM40Q8WWA1 233 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 RPL10LQ96L21 214 aaKnown RBP12.15□□□□□ -0.46
USP1-201ENST00000339950 SERPINI1Q99574 410 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 ALG9Q9H6U8 611 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 GPAMQ9HCL2 828 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 COPG2Q9UBF2 871 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 BTRCQ9Y297 605 aa12.15□□□□□ -0.46
USP1-201ENST00000339950 NT5C1B-RDH14C9J2C7 533 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 NR5A2O00482 541 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 TNPO2O14787 897 aaKnown RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 GAS2O43903 313 aaKnown RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 SH3BGRLO75368 114 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CELF2O95319 508 aaKnown RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 EPHX2P34913 555 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 FDFT1P37268 417 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CCNFP41002 786 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CYLC2Q14093 348 aaPredicted RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 SPOUT1Q5T280 376 aaKnown RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 DRICH1Q6PGQ1 229 aaPredicted RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 NAT16Q8N8M0 369 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 FCRL3Q96P31 734 aaPredicted RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 NHSL1Q5SYE7 1610 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 LAMB2P55268 1798 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 TBX18O95935 607 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CD4P01730 458 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 STMN1P16949 149 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ICAM3P32942 547 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 PBX3P40426 434 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 IDH3AP50213 366 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 LILRA4P59901 499 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 DLG1Q12959 904 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 PTK2BQ14289 1009 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ANKRD20A4Q4UJ75 823 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 C6orf52Q5T4I8 152 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ECSITQ9BQ95 431 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ZNF670Q9BS34 389 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ABCG8Q9H221 673 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms