RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SPECC1L-ADORA2AF8WAN1 911 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 RNF103O00237 685 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 CES2O00748 559 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 RBP3P10745 1247 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 PABPC1P11940 636 aaKnown RBP16.88■□□□□ 0.29
SHOX-201ENST00000334060 TGM2P21980 687 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 CTHP32929 405 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 ETFBP38117 255 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 MAPKAPK2P49137 400 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 DGKGP49619 791 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 GALK1P51570 392 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 AP1B1Q10567 949 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 SERINC3Q13530 473 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 TDGQ13569 410 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 IHHQ14623 411 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 PON2Q15165 354 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 OASLQ15646 514 aaKnown RBP16.88■□□□□ 0.29
SHOX-201ENST00000334060 MPP7Q5T2T1 576 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 CPA6Q8N4T0 437 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 EPC1Q9H2F5 836 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 ATP13A1Q9HD20 1204 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 SEPT10Q9P0V9 454 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 IGSF9Q9P2J2 1179 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 EFR3BQ9Y2G0 817 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 MTF2Q9Y483 593 aaPredicted RBP16.88■□□□□ 0.29
SHOX-201ENST00000334060 TTC28Q96AY4 2481 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 KRBA1A5PL33 1030 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 H7C0C1 242 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 RGRP47804 291 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 ATP5OP48047 213 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 SLC10A7Q0GE19 358 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 PUS10Q3MIT2 529 aaKnown RBP16.88■□□□□ 0.29
SHOX-201ENST00000334060 SYCP2LQ5T4T6 812 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 EXOC2Q96KP1 924 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 L2HGDHQ9H9P8 463 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 PDFQ9HBH1 243 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 USP29Q9HBJ7 922 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 IPO11Q9UI26 975 aaKnown RBP16.88■□□□□ 0.29
SHOX-201ENST00000334060 SLCO3A1Q9UIG8 710 aa16.88■□□□□ 0.29
SHOX-201ENST00000334060 ILVBLA1L0T0 632 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 TYW5A2RUC4 315 aaKnown RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 ZSCAN5CA6NGD5 496 aaPredicted RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 SEC13P55735 322 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 PRKD1Q15139 912 aaPredicted RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 C6orf118Q5T5N4 469 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 TTC39BQ5VTQ0 682 aaPredicted RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 SETD3Q86TU7 594 aaPredicted RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 FAM71DQ8N9W8 422 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 ATXN2LQ8WWM7 1075 aaKnown RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 MAGOHBQ96A72 148 aaKnown RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 KRT12Q99456 494 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 ACE2Q9BYF1 805 aaPredicted RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 AMACRQ9UHK6 382 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 FCF1Q9Y324 198 aaKnown RBP16.87■□□□□ 0.29
SHOX-201ENST00000334060 WDFY4Q6ZS81 3184 aa16.87■□□□□ 0.29
SHOX-201ENST00000334060 EGFP01133 1207 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 HTR7P34969 479 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 MAXP61244 160 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 WASHC5Q12768 1159 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 TRADDQ15628 312 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 PTPRNQ16849 979 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 CNTD1Q8N815 330 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 CSGALNACT1Q8TDX6 532 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 MYO19Q96H55 970 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 QKIQ96PU8 341 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHOX-201ENST00000334060 TRIM51Q9BSJ1 452 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 CIPCQ9C0C6 399 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 CHRM1P11229 460 aaPredicted RBP16.86■□□□□ 0.29
SHOX-201ENST00000334060 SRFP11831 508 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 NDST2P52849 883 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 DGKKQ5KSL6 1271 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 MBLAC2Q68D91 279 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 FSTL4Q6MZW2 842 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 PKN3Q6P5Z2 889 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 KIAA0907Q7Z7F0 614 aaPredicted RBP16.86■□□□□ 0.29
SHOX-201ENST00000334060 ATPAF2Q8N5M1 289 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 CCDC110Q8TBZ0 833 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 DEC1Q9P2X7 70 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHOX-201ENST00000334060 DUSP12Q9UNI6 340 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 FAM50BQ9Y247 325 aa16.86■□□□□ 0.29
SHOX-201ENST00000334060 V9GYY5 206 aaPredicted RBP16.86■□□□□ 0.29
SHOX-201ENST00000334060 KCNN4O15554 427 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 KAT7O95251 611 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 HLA-EP13747 358 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 GKP32189 559 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 COILP38432 576 aaPredicted RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 WASP42768 502 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 VPS41P49754 854 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 CLCN6P51797 869 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 ZNF135P52742 658 aaPredicted RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 MTA1Q13330 715 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 OLIG2Q13516 323 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 BYSLQ13895 437 aaKnown RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 NAA30Q147X3 362 aaPredicted RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 CYP1B1Q16678 543 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 FAXCQ5TGI0 409 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 DARS2Q6PI48 645 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms