RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 NR1H4Q96RI1 486 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PARK7Q99497 189 aaKnown RBP11.93□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ACE2Q9BYF1 805 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SSX2IPQ9Y2D8 614 aa11.93□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PTPRFP10586 1907 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GSRP00390 522 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 F7P08709 466 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 THRAP10827 490 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PSEN2P49810 448 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NUDT2P50583 147 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CCNHP51946 323 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CRYBB1P53674 252 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 MED21Q13503 144 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CCNYL1Q8N7R7 359 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NT5C3BQ969T7 300 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SORT1Q99523 831 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KATNBL1Q9H079 304 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 AAR2Q9Y312 384 aaKnown RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 MGAMO43451 1857 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CFLARO15519 480 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 THP07101 528 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CPT1AP50416 773 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ZNF135P52742 658 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 INTS6LQ5JSJ4 861 aaKnown RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 METTL21CQ5VZV1 264 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NAIF1Q69YI7 327 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TMEM86AQ8N2M4 240 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ATPAF2Q8N5M1 289 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 IPMKQ8NFU5 416 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CASS4Q9NQ75 786 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GJD2Q9UKL4 321 aa11.92□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 AVPR1AP37288 418 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PSEN1P49768 467 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 POLE2P56282 527 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 IRF9Q00978 393 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KLF10Q13118 480 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SLC30A9Q6PML9 568 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 METTL23Q86XA0 190 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ACTRT2Q8TDY3 377 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 FAM136AQ96C01 138 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 HDAC11Q96DB2 347 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PCED1BQ96HM7 432 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 FSD1LQ9BXM9 530 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 MYBPHLA2RUH7 354 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CYP2B6P20813 491 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CPOXP36551 454 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 HCAR3P49019 387 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NAGLUP54802 743 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ART3Q13508 389 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PEX6Q13608 980 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GRB14Q14449 540 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 HPS6Q86YV9 775 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ST13P4Q8IZP2 240 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PHTF2Q8N3S3 785 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SMARCD1Q96GM5 515 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KATNAL1Q9BW62 490 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KLHL4Q9C0H6 718 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ANKRD6Q9Y2G4 727 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ACOT9Q9Y305 439 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 HDAC3O15379 428 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 DDHD2O94830 711 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 HOXD8P13378 290 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PAMP19021 973 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 DNAJB2P25686 324 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RPL14P50914 215 aaKnown RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CDC16Q13042 620 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 POU6F1Q14863 301 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RNF220Q5VTB9 566 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 FRMD7Q6ZUT3 714 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PPHLN1Q8NEY8 458 aaKnown RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 OR6Y1Q8NGX8 325 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TEKT5Q96M29 485 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GAD1Q99259 594 aa11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GATA5Q9BWX5 397 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ZCWPW2A0A1B0GU75 182 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CCNT2O60583 730 aaKnown RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ANXA9O76027 345 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LRIG2O94898 1065 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GRIA4P48058 902 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KPNA2P52292 529 aaKnown RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PRKAA1Q13131 559 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TUBB3Q13509 450 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SEPT6Q14141 434 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 OTUD1Q5VV17 481 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LIPMQ5VYY2 423 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 FBXW8Q8N3Y1 598 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ICA1LQ8NDH6 482 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CACNG4Q9UBN1 327 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CDYLQ9Y232 598 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 POMPQ9Y244 141 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RAP2CQ9Y3L5 183 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TK2O00142 265 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms