RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NOSIPQ9Y314 301 aaKnown RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 SCN9AQ15858 1988 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ZNFX1Q9P2E3 1918 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 A0A0G2JMP0 313 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 A0A0X1KG70 313 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 F5H6K3 240 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 MEIS1O00470 390 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 KLF11O14901 512 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 RFPL2O75678 378 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 MT-ND3P03897 115 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 KRT8P05787 483 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TBXAS1P24557 533 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 KLRC2P26717 231 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TTKP33981 857 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 MRPS15P82914 257 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 SNX17Q15036 470 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CDK10Q15131 360 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CHI3L2Q15782 390 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 EPC2Q52LR7 807 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 NDUFAF5Q5TEU4 345 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 APOBEC3HQ6NTF7 200 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CDC42EP5Q6NZY7 148 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 KCTD8Q6ZWB6 473 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ARMC8Q8IUR7 673 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 SAMD14Q8IZD0 417 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TTLQ8NG68 377 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ZFP90Q8TF47 636 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ANKRD49Q8WVL7 239 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ALKBH8Q96BT7 664 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 IER2Q9BTL4 223 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 APOL6Q9BWW8 343 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ANKRD60Q9BZ19 345 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ENPP5Q9UJA9 477 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CNOT11Q9UKZ1 510 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TESMINQ9Y4I5 508 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TOR1BO14657 336 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ADSSP30520 456 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 SSTR1P30872 391 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TAF12Q16514 161 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CLVS2Q5SYC1 327 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ADGRD1Q6QNK2 874 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 KCNT2Q6UVM3 1135 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CDHR3Q6ZTQ4 885 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CRLF3Q8IUI8 442 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TPH2Q8IWU9 490 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 APOPT1Q96IL0 206 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ZFYVE19Q96K21 471 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 C1orf74Q96LT6 269 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CSF3RQ99062 836 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TM9SF2Q99805 663 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ZSCAN5AQ9BUG6 496 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CHID1Q9BWS9 393 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 WDR12Q9GZL7 423 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 RAD21L1Q9H4I0 556 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 FARSBQ9NSD9 589 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 EIF3LQ9Y262 564 aaKnown RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 CAB39Q9Y376 341 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF646O15015 1829 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-201ENST00000328923 LOXHD1Q8IVV2 1947 aa12.06□□□□□ -0.48
SHMT2-201ENST00000328923 HTRA2O43464 458 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 MAN1A2O60476 641 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CCNKO75909 580 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 EPN2O95208 641 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 ACAT1P24752 427 aaKnown RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 RRM2P31350 389 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 EVI2BP34910 448 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 GRIA1P42261 906 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 MS4A2Q01362 244 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 FMO1Q01740 532 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 OCA2Q04671 838 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 DUSP7Q16829 419 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 FAM214AQ32MH5 1076 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 TEX44Q53QW1 395 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CHST15Q7LFX5 561 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF720Q7Z2F6 126 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 ARHGEF19Q8IW93 802 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 ADGRG5Q8IZF4 528 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 MYCT1Q8N699 235 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 RNF148Q8N7C7 305 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 GLIS1Q8NBF1 620 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 PDPRQ8NCN5 879 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 DCAKDQ8WVC6 231 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 E2F7Q96AV8 911 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 LENG9Q96B70 501 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CFAP36Q96G28 342 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CCDC120Q96HB5 630 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 DEPDC7Q96QD5 511 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 FIZ1Q96SL8 496 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms