RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PTPN11Q06124 597 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 KLF1Q13351 362 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ITGA7Q13683 1181 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 MAPRE2Q15555 327 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ERO1BQ86YB8 467 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 C12orf29Q8N999 325 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 PCYOX1LQ8NBM8 494 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 LENG9Q96B70 501 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CPXM1Q96SM3 734 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 OXCT2Q9BYC2 517 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TRIM8Q9BZR9 551 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 C6orf62Q9GZU0 229 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 AGO4Q9HCK5 861 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 C6orf203Q9P0P8 240 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 SCHIP1Q9P0W5 487 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CROTQ9UKG9 612 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CNTNAP1P78357 1384 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM233B4DJY2 109 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 RNF103O00237 685 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CCDC166P0CW27 439 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 MMP8P22894 467 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CYP3A7P24462 503 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 FASP25445 335 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 PPARGP37231 505 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CLK2P49760 499 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CLCN3P51790 818 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 RAP1GDS1P52306 607 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CDH13P55290 713 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 SNAPC2Q13487 334 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ZNF460Q14592 562 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 XKR3Q5GH77 459 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 FAM160B1Q5W0V3 765 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TRAF7Q6Q0C0 670 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 RPS27LQ71UM5 84 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TDRPQ86YL5 185 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ZBTB8BQ8NAP8 495 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 NSUN6Q8TEA1 469 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 HPDLQ96IR7 371 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CNPY3Q9BT09 278 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CLK4Q9HAZ1 481 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 SNX15Q9NRS6 342 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 UTP6Q9NYH9 597 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 A0A088AWK7 358 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 NDUFB5O43674 189 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TCEA3O75764 348 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TOMM70O94826 608 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 PABPC4LP0CB38 370 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 JAK1P23458 1154 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ATXN1P54253 815 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TPI1P60174 286 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 GTF2BQ00403 316 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 NFYCQ13952 458 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 CCNIQ14094 377 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 KIZQ2M2Z5 673 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ZFP1Q6P2D0 407 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 PACS1Q6VY07 963 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 KYAT3Q6YP21 454 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 CCDC80Q76M96 950 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SETD3Q86TU7 594 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TFAP2BQ92481 460 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 COX4I2Q96KJ9 171 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 C7orf26Q96N11 449 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 CGRRF1Q99675 332 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 EBNA1BP2Q99848 306 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ACE2Q9BYF1 805 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 B3GNT5Q9BYG0 378 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 OSBPL6Q9BZF3 934 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 MRPL40Q9NQ50 206 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 PHF24Q9UPV7 400 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ANGPTL3Q9Y5C1 460 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ROBO3Q96MS0 1386 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 LRP5O75197 1615 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 AKAP11Q9UKA4 1901 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ERI2A8K979 691 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 H0Y626 953 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 PDHXO00330 501 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 BUD23O43709 281 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TSC22D2O75157 780 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 MICAL2O94851 1124 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TRIM16O95361 564 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TXNP10599 105 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 UNGP13051 313 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 CRABP2P29373 138 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 STAT5BP51692 787 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TPTEP56180 551 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 IL5RAQ01344 420 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 CNTN2Q02246 1040 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 CTBP1Q13363 440 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ZACNQ401N2 412 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 BOLA3Q53S33 107 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 IQSEC1Q6DN90 963 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 NCCRP1Q6ZVX7 275 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SPPL2CQ8IUH8 684 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SLC41A1Q8IVJ1 513 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SLC7A14Q8TBB6 771 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TEPSINQ96N21 525 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SH3GL1Q99961 368 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SNRNP25Q9BV90 132 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms