RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SULT2A1Q06520 285 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 DAB2IPQ5VWQ8 1189 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 FCRL2Q96LA5 508 aaPredicted RBP13.71□□□□□ -0.21
RFFL-201ENST00000315249 TRIM4Q9C037 500 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 DERAQ9Y315 318 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
RFFL-201ENST00000315249 PCDHA3Q9Y5H8 950 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 ISM1B1AKI9 464 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 MYO1CO00159 1063 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 GRM6O15303 877 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 TKTP29401 623 aaKnown RBP13.71□□□□□ -0.21
RFFL-201ENST00000315249 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 CRTC3Q6UUV7 619 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 SLC51AQ86UW1 340 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 B3GALT6Q96L58 329 aa13.71□□□□□ -0.21
RFFL-201ENST00000315249 KANSL1LA0AUZ9 987 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 SERPINB4P48594 390 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 CCR4P51679 360 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 VSTM1Q6UX27 236 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 ACTRT1Q8TDG2 376 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 KRCC1Q9NPI7 259 aaPredicted RBP13.71□□□□□ -0.22
RFFL-201ENST00000315249 STOML1Q9UBI4 398 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 STK39Q9UEW8 545 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 CPA3P15088 417 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 CNTFP26441 200 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 ST3GAL1Q11201 340 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 ABRQ12979 859 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 CYTH1Q15438 398 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 GRTP1Q5TC63 336 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 AGBL2Q5U5Z8 902 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 CNSTQ6PJW8 725 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 AUTS2Q8WXX7 1259 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 INPP5DQ92835 1189 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 RERGQ96A58 199 aaPredicted RBP13.71□□□□□ -0.22
RFFL-201ENST00000315249 ERP27Q96DN0 273 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 ZFP14Q9HCL3 533 aa13.71□□□□□ -0.22
RFFL-201ENST00000315249 EOMESO95936 686 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 HNF4AP41235 474 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 ACTN3Q08043 901 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 MILR1Q7Z6M3 343 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 SLC26A11Q86WA9 606 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 CENPLQ8N0S6 344 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 MRGBPQ9NV56 204 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 GPN3Q9UHW5 284 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 AGO1Q9UL18 857 aaKnown RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 CITO14578 2027 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 TMEM114B3SHH9 223 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 STBD1O95210 358 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 SLC5A3P53794 718 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 STK40Q8N2I9 435 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 A0A0B4J269 797 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 B2RBV5 119 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 MAPK8P45983 427 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 SARSP49591 514 aaKnown RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 GRSF1Q12849 480 aaKnown RBP eCLIP13.7□□□□□ -0.22
RFFL-201ENST00000315249 MPPE1Q53F39 396 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 CHST9Q7L1S5 443 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 PSTKQ8IV42 348 aaKnown RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 ZNF655Q8N720 491 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 FBXO25Q8TCJ0 367 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 VAT1Q99536 393 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 ABCG8Q9H221 673 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 A0A088AWK7 358 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 TPST1O60507 370 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 PGAM1P18669 254 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 ZNF10P21506 573 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 ATAD3BQ5T9A4 648 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 AMIGO3Q86WK7 504 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 ARL14EPQ8N8R7 260 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 EME1Q96AY2 570 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 PABPC3Q9H361 631 aaKnown RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 RNF186Q9NXI6 227 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 TRBV23OR9-2A0A075B6M9 112 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 RASGRP1O95267 797 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 MPOP05164 745 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 SSTR1P30872 391 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 PDPK2PQ6A1A2 396 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 GDF6Q6KF10 455 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 ALKBH2Q6NS38 261 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 USP7Q93009 1102 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 FAM126AQ9BYI3 521 aaPredicted RBP13.7□□□□□ -0.22
RFFL-201ENST00000315249 CDHR5Q9HBB8 845 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 GNPTGQ9UJJ9 305 aa13.7□□□□□ -0.22
RFFL-201ENST00000315249 PCCBP05166 539 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 PPP2R1BP30154 601 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 RPS7P62081 194 aaKnown RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 CYP2A13Q16696 494 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 LONP2Q86WA8 852 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms