RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 USP18Q9UMW8 372 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 SOCS2O14508 198 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 AQP9O43315 295 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 CHRNGP07510 517 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 CA8P35219 290 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 IREB2P48200 963 aaKnown RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 MRPS9P82933 396 aaKnown RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 TAZQ16635 292 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 NHSL2Q5HYW2 709 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 CHST15Q7LFX5 561 aaPredicted RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 DUS2Q9NX74 493 aaKnown RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 WDR27A2RRH5 827 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 H0YJX3 145 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 ITGBL1O95965 494 aaPredicted RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 SEZ6Q53EL9 994 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 GADL1Q6ZQY3 521 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 OR5B17Q8NGF7 314 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 GBA3Q9H227 469 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 PCDHA11Q9Y5I1 949 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 SAC3D1A6NKF1 404 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 DHX15O43143 795 aaKnown RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 EXTL3O43909 919 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 TIPRLO75663 272 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 MPSTP25325 297 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 CNTFP26441 200 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 GRM5P41594 1212 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 DMPKQ09013 629 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 RALGDSQ12967 914 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 PTPN20Q4JDL3 420 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 LDLRAP1Q5SW96 308 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 BSPRYQ5W0U4 402 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 CMASQ8NFW8 434 aaPredicted RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 ACMSDQ8TDX5 336 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 TFAP2BQ92481 460 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 TFAP2CQ92754 450 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
SPSB4-201ENST00000310546 RMDN3Q96TC7 470 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 CYP26B1Q9NR63 512 aa18.36■□□□□ 0.53
SPSB4-201ENST00000310546 AKAP10O43572 662 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 NOL3O60936 208 aaKnown RBP18.35■□□□□ 0.53
SPSB4-201ENST00000310546 LSM8O95777 96 aaKnown RBP18.35■□□□□ 0.53
SPSB4-201ENST00000310546 F7P08709 466 aaPredicted RBP18.35■□□□□ 0.53
SPSB4-201ENST00000310546 CCR10P46092 362 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 FSTL1Q12841 308 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 KCNJ8Q15842 424 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 ZBTB41Q5SVQ8 909 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 APOBEC3FQ8IUX4 373 aaKnown RBP18.35■□□□□ 0.53
SPSB4-201ENST00000310546 LPAR1Q92633 364 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 LRRC39Q96DD0 335 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 KLHL25Q9H0H3 589 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 SDCBP2Q9H190 292 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 TXNDC16Q9P2K2 825 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 PERM1Q5SV97 790 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 SH3PXD2AQ5TCZ1 1133 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 CHSY3Q70JA7 882 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 SYTL5Q8TDW5 730 aaPredicted RBP18.35■□□□□ 0.53
SPSB4-201ENST00000310546 ACDQ96AP0 544 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 ASB9Q96DX5 294 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 IMPG2Q9BZV3 1241 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 RNF146Q9NTX7 359 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 SMOXQ9NWM0 555 aa18.35■□□□□ 0.53
SPSB4-201ENST00000310546 METTL18O95568 372 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 GARTP22102 1010 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 DCKP27707 260 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 RPS3AP61247 264 aaKnown RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 KCNC4Q03721 635 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 TRIM25Q14258 630 aaKnown RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 TMEM132BQ14DG7 1078 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 NEPROQ6NW34 567 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 SCARA5Q6ZMJ2 495 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 IGFN1Q86VF2 1251 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 PCYOX1LQ8NBM8 494 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 ZNF420Q8TAQ5 688 aaPredicted RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 ATP6V0A1Q93050 837 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 CNDP1Q96KN2 507 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 NSMCE3Q96MG7 304 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 MTG1Q9BT17 334 aaPredicted RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 MOCS1Q9NZB8 636 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 RBBP6Q7Z6E9 1792 aaKnown RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 A8MU76 341 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 C9IYK1 514 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 GPR25O00155 361 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 TRIM38O00635 465 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 KCNH1O95259 989 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 CD19P15391 556 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 HSD17B4P51659 736 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 RHDQ02161 417 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 RAB6CQ53S08 254 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 ZNF534Q76KX8 674 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 PLD6Q8N2A8 252 aaKnown RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 TRUB1Q8WWH5 349 aaKnown RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 CDKL2Q92772 493 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 SLCO4A1Q96BD0 722 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 APBA2Q99767 749 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 ILKAPQ9H0C8 392 aaPredicted RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 RAB6CQ9H0N0 254 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 AGO2Q9UKV8 859 aaKnown RBP18.34■□□□□ 0.53
SPSB4-201ENST00000310546 CNTN6Q9UQ52 1028 aa18.34■□□□□ 0.53
SPSB4-201ENST00000310546 NOX1Q9Y5S8 564 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms