RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PYDC2Q56P42 97 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF668Q96K58 619 aaPredicted RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 OSBPL11Q9BXB4 747 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 ZC2HC1CQ53FD0 456 aaPredicted RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 STK32AQ8WU08 396 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 RFT1Q96AA3 541 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 LENG9Q96B70 501 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 TRIM10Q9UDY6 481 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 SSR3Q9UNL2 185 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 CCR4P51679 360 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 CBFBQ13951 182 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 TSPAN14Q8NG11 270 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 L2HGDHQ9H9P8 463 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 BARX2Q9UMQ3 279 aaPredicted RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 DLC1Q96QB1 1528 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 PBLDP30039 288 aaPredicted RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 NR1H2P55055 460 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 RALGDSQ12967 914 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 POTEHQ6S545 545 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 CPVLQ9H3G5 476 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 SUCOQ9UBS9 1254 aaKnown RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 E9PCH4 1651 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 PLK4O00444 970 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 BGNP21810 368 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 SRP54P61011 504 aaKnown RBP15.71■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF621Q6ZSS3 439 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 TMEM121Q9BTD3 319 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 LYVE1Q9Y5Y7 322 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 CRB1P82279 1406 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 H3BNH8 94 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 PCDH8O95206 1070 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF222Q9UK12 451 aa15.71■□□□□ 0.1
HCFC1-201ENST00000310441 DCDC2CA8MYV0 355 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF879B4DU55 563 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 FARP2O94887 1054 aaPredicted RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 SERPINA1P01009 418 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF398Q8TD17 642 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PNPLA3Q9NST1 481 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PGRMC2O15173 223 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 OMPP47874 163 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 DDX18Q9NVP1 670 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 WBP11Q9Y2W2 641 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PNPLA6Q8IY17 1366 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 SEMA3DO95025 777 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 UPP2O95045 317 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 IFNGP01579 166 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 FCGRTP55899 365 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 TMEM176AQ96HP8 235 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 REXO5Q96IC2 774 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 TBL1YQ9BQ87 522 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 CAB39LQ9H9S4 337 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 SMURF2Q9HAU4 748 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 COMMD3-BMI1R4GMX3 469 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ABCA6Q8N139 1617 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 CHST10O43529 356 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ARFIP1P53367 373 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 POU6F1Q14863 301 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 HLFQ16534 295 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 DDI2Q5TDH0 399 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 EMC1Q8N766 993 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PI4K2AQ9BTU6 479 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 MUC13Q9H3R2 512 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 IKZF3Q9UKT9 509 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ATXN2Q99700 1313 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PRODHO43272 600 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PTPN1P18031 435 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 BMP7P18075 431 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 XIAPP98170 497 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 MRTO4Q9UKD2 239 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 SERPINB7O75635 380 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ACO1P21399 889 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 PPIBP23284 216 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 TUBA4AP68366 448 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 COLGALT1Q8NBJ5 622 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ARRDC4Q8NCT1 418 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 YME1L1Q96TA2 773 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 GGA3Q9NZ52 723 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 H3BNX3 289 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 LIN7AO14910 233 aaPredicted RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 CSH1P0DML2 217 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 CSH2P0DML3 217 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 TYMPP19971 482 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 THPOP40225 353 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 GTF2A2P52657 109 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 HUNKP57058 714 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 NR1D2Q14995 579 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 SNIP1Q8TAD8 396 aaKnown RBP15.7■□□□□ 0.1
HCFC1-201ENST00000310441 MROH8Q9H579 483 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 SQORQ9Y6N5 450 aa15.7■□□□□ 0.1
HCFC1-201ENST00000310441 ILDR2Q71H61 639 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 AKAP14Q86UN6 197 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 TEX47Q8TBZ9 253 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 FAM118BQ9BPY3 351 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 RNF181Q9P0P0 153 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 VPS4AQ9UN37 437 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms