RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 THAP1Q9NVV9 213 aa10.55□□□□□ -0.72
APOBEC3F-201ENST00000308521 RALGAPA2Q2PPJ7 1873 aa10.55□□□□□ -0.72
APOBEC3F-201ENST00000308521 CBFA2T3O75081 653 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 UQCRBP14927 111 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 VARSP26640 1264 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 BTKQ06187 659 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 STX3Q13277 289 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 UPP1Q16831 310 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 PKDCCQ504Y2 493 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 GRAMD4Q6IC98 578 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 UNC93AQ86WB7 457 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 RASSF3Q86WH2 238 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CFAP36Q96G28 342 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 SCLYQ96I15 445 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CGREF1Q99674 301 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 HNRNPABQ99729 332 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 RHOBTB2Q9BYZ6 727 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 EBF3Q9H4W6 596 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 POPDC2Q9HBU9 364 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLC38A7Q9NVC3 462 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 KIAA1257Q9ULG3 409 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 PDCD11Q14690 1871 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 KANSL1LA0AUZ9 987 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 MYBPHLA2RUH7 354 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CXorf49A8MYA2 514 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 PAPSS1O43252 624 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 ZNF623O75123 536 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 PDGFRAP16234 1089 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 TFE3P19532 575 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 SERPINB9P50453 376 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 ALDH18A1P54886 795 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CCL23P55773 120 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 IRX4P78413 519 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 MTM1Q13496 603 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 MED21Q13503 144 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 TUBB3Q13509 450 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 TFDP2Q14188 446 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 THOC7Q6I9Y2 204 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 PGM2L1Q6PCE3 622 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 RAPH1Q70E73 1250 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CTAGE3PQ8IX95 158 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 NUP93Q8N1F7 819 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 CRYBG2Q8N1P7 616 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 DBF4BQ8NFT6 615 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 RXFP2Q8WXD0 754 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 RILPQ96NA2 401 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 TSEN34Q9BSV6 310 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 KLHL4Q9C0H6 718 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 FADS3Q9Y5Q0 445 aa10.54□□□□□ -0.72
APOBEC3F-201ENST00000308521 TRIM43BA6NCK2 446 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 AP1G1O43747 822 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 PEX1O43933 1283 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 NBNO60934 754 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 SUPT3HO75486 399 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 USP1O94782 785 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 APOEP02649 317 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MIPP30301 263 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 GABRB2P47870 512 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 NDUFV1P49821 464 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 GATMP50440 423 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 ATXN1P54253 815 aaKnown RBP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 GPNMBQ14956 572 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 INAQ16352 499 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MAP7D1Q3KQU3 841 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 SCYL2Q6P3W7 929 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 TTC39CQ8N584 583 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLC43A3Q8NBI5 491 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MCUQ8NE86 351 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 HSPH1Q92598 858 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MCRS1Q96EZ8 462 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MPP4Q96JB8 637 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 KCNK16Q96T55 309 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 FAM96AQ9H5X1 160 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 PLAC1Q9HBJ0 212 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 USP29Q9HBJ7 922 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 CRTAC1Q9NQ79 661 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 CASQ2O14958 399 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 DDHD2O94830 711 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MYL4P12829 197 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 NAT1P18440 290 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 CNTFP26441 200 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 L1CAMP32004 1257 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 BCAR1P56945 870 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MAP3K7CLP57077 242 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 CCDC153Q494R4 210 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 RABGAP1LQ5R372 815 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 C4orf22Q6V702 233 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 PAQR9Q6ZVX9 377 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 WDR75Q8IWA0 830 aaKnown RBP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 TOP6BLQ8N6T0 577 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 ANKRD52Q8NB46 1076 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 FNDC8Q8TC99 324 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms