RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 TMEM51Q9NW97 253 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 MAFBQ9Y5Q3 323 aaPredicted RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 TOPAZ1Q8N9V7 1692 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 TMEM114B3SHH9 223 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 CYP1A1P04798 512 aaPredicted RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 MAP2K5Q13163 448 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 MSLNQ13421 630 aaPredicted RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 TP53BP2Q13625 1128 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 TRABD2AQ86V40 505 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 STX19Q8N4C7 294 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 NETO2Q8NC67 525 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 ZSCAN18Q8TBC5 510 aaPredicted RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 EXOSC4Q9NPD3 245 aaKnown RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 ZMYM5Q9UJ78 669 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 CYP2A7P20853 494 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 VPS33AQ96AX1 596 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 MED8Q96G25 268 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 ASB2Q96Q27 587 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 BBS7Q8IWZ6 715 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 BST1Q10588 318 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 CSTF3Q12996 717 aaKnown RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 HGH1Q9BTY7 390 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 LRRC4CQ9HCJ2 640 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 IMPAD1Q9NX62 359 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 PRDM4Q9UKN5 801 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 IPPQ9Y573 584 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 WDR47O94967 919 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 IGSF6O95976 241 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 KRT6AP02538 564 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 KRT6BP04259 564 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 ITGA2BP08514 1039 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 KRT6CP48668 564 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 UBAP2LQ14157 1087 aaKnown RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 CYP2R1Q6VVX0 501 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 PARVBQ9HBI1 364 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 SIX2Q9NPC8 291 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 M0R2N6 131 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 CILPO75339 1184 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 PGK1P00558 417 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 MMP3P08254 477 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 TUFMP49411 452 aaKnown RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 XRCC4Q13426 336 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 SKIV2LQ15477 1246 aaKnown RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 TTC27Q6P3X3 843 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 ARCQ7LC44 396 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 MILR1Q7Z6M3 343 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 ZNF398Q8TD17 642 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 PYDC1Q8WXC3 89 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 CDV3Q9UKY7 258 aaKnown RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 LRCH1Q9Y2L9 728 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 GRIA4P48058 902 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 PKNOX1P55347 436 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 VAC14Q08AM6 782 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 NOMO1Q15155 1222 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 ZFP1Q6P2D0 407 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 NET1Q7Z628 596 aaPredicted RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 AGAP11Q8TF27 550 aa16.6■□□□□ 0.25
BRD3-201ENST00000303407 SEMA4BQ9NPR2 832 aaPredicted RBP16.6■□□□□ 0.25
BRD3-201ENST00000303407 CHRNB2P17787 502 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 CCT8P50990 548 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 BHLHE22Q8NFJ8 381 aaPredicted RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 UCMAQ8WVF2 138 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 NMD3Q96D46 503 aaKnown RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 B3GNT5Q9BYG0 378 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 UXTQ9UBK9 157 aaPredicted RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 BIRC5O15392 142 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 NCALDP61601 193 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SLC25A3Q00325 362 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 BCL2L1Q07817 233 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 FAM98BQ52LJ0 330 aaKnown RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 SLC44A2Q8IWA5 706 aaPredicted RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 ACMSDQ8TDX5 336 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 ZYG11BQ9C0D3 744 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 DOLKQ9UPQ8 538 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 PAPSS1O43252 624 aaPredicted RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 ZNF862O60290 1169 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 CCDC166P0CW27 439 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 FECHP22830 423 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 FNBP1LQ5T0N5 605 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 FAM45BPQ6NSW5 357 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 MICU2Q8IYU8 434 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 FAM45AQ8TCE6 357 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SERAC1Q96JX3 654 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 NDNQ99608 321 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SLC17A7Q9P2U7 560 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 FAM50BQ9Y247 325 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SYNCRIPO60506 623 aaKnown RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 SEC22BO75396 215 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 RPL9P32969 192 aaKnown RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 GPSM1Q86YR5 675 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SLC25A23Q9BV35 468 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SLCO1B3Q9NPD5 702 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 SORCS3Q9UPU3 1222 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 ZNF142P52746 1687 aaPredicted RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 A8MX80 341 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 INPP4BO15327 924 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms