RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SPDYCQ5MJ68 293 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 ZCCHC9Q8N567 271 aaKnown RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 GSDMCQ9BYG8 508 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 KLK14Q9P0G3 267 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 ATPIF1Q9UII2 106 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 PCDHA3Q9Y5H8 950 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 FAM92AA1XBS5 289 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 RECQL5O94762 991 aaPredicted RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 VAPBO95292 243 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 UMPSP11172 480 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 TKTP29401 623 aaKnown RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 OXCT1P55809 520 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 DNAJB14Q8TBM8 379 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 MBOAT7Q96N66 472 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 VPS35Q96QK1 796 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 GLI2P10070 1586 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 MSH4O15457 936 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 SERPINA1P01009 418 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 OR1G1P47890 313 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 SLC11A2P49281 568 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 NAA20P61599 178 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 HSF2Q03933 536 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 IER5Q5VY09 327 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 MFSD7Q6UXD7 560 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 ULK2Q8IYT8 1036 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 MCOLN2Q8IZK6 566 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 CELF6Q96J87 481 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 EHD1Q9H4M9 534 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 ANKEF1Q9NU02 776 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 SORCS3Q9UPU3 1222 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 LRRC7Q96NW7 1537 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 TEX28O15482 410 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 GTF2E2P29084 291 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 SEPHS1P49903 392 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 AUHQ13825 339 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 SBK1Q52WX2 424 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 TDRD10Q5VZ19 366 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 CCDC185Q8N715 623 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 TTLL6Q8N841 843 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 MINDY2Q8NBR6 621 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 RASSF5Q8WWW0 418 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 SLC4A5Q9BY07 1137 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 SPAG4Q9NPE6 437 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 TBC1D13Q9NVG8 400 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 OGDHLQ9ULD0 1010 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 ERGIC3Q9Y282 383 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 TRIM38O00635 465 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 UQCRBP14927 111 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 CCR3P51677 355 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 DALRD3Q5D0E6 543 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 LPCAT4Q643R3 524 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 ARMC8Q8IUR7 673 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 ETNPPLQ8TBG4 499 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 PTCD3Q96EY7 689 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 FRMD6Q96NE9 622 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 DNAJC18Q9H819 358 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 MARCH7Q9H992 704 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 XPNPEP3Q9NQH7 507 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 CHST7Q9NS84 486 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 NUP50Q9UKX7 468 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 POLR1DQ9Y2S0 133 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 PNPLA4P41247 253 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 FAM131AQ6UXB0 335 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 HGH1Q9BTY7 390 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 SEMA4BQ9NPR2 832 aaPredicted RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 LNPEPQ9UIQ6 1025 aa15.07■□□□□ 0
SCN3B-201ENST00000299333 ABT1Q9ULW3 272 aaKnown RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 GPC6Q9Y625 555 aaPredicted RBP15.07■□□□□ 0
SCN3B-201ENST00000299333 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 OGTO15294 1046 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 NOS1APO75052 506 aaPredicted RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 TGFBR2P37173 567 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 DDR1Q08345 913 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 GIT2Q14161 759 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 LDLRAP1Q5SW96 308 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 SLC9A4Q6AI14 798 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 CD302Q8IX05 232 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 MCFD2Q8NI22 146 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 IFRD1O00458 451 aaPredicted RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 KPNA6O60684 536 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 NPR2P20594 1047 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 PAGE2BQ5JRK9 111 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 CBWD3Q5JTY5 395 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 CBWD5Q5RIA9 395 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 FAM20CQ8IXL6 584 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 S100A13Q99584 98 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 CDHR5Q9HBB8 845 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 KBTBD4Q9NVX7 518 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 RBM22Q9NW64 420 aaKnown RBP eCLIP15.06■□□□□ 0
SCN3B-201ENST00000299333 TMCO1Q9UM00 188 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 ABCC3O15438 1527 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 A8MUI8 341 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 RGS14O43566 566 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 ZC3H11AO75152 810 aaKnown RBP eCLIP15.06■□□□□ 0
SCN3B-201ENST00000299333 F9P00740 461 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 MSR1P21757 451 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 ABCG1P45844 678 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 GPR15P49685 360 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 TOB1P50616 345 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms