RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TAF10Q12962 218 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 CYP4Z1Q86W10 505 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 MYCBPAPQ8TBZ2 947 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 FCRL2Q96LA5 508 aaPredicted RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 C10orf88Q9H8K7 445 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 ANKRD6Q9Y2G4 727 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 EIF4E1BA6NMX2 242 aaKnown RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 BUD23O43709 281 aaKnown RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 PEX10O60683 326 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 ADH1CP00326 375 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 INHAP05111 366 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 AMD1P17707 334 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 PLOD1Q02809 727 aaPredicted RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 ATAD3BQ5T9A4 648 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 RAET1GQ6H3X3 334 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 GRAMD4Q6IC98 578 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 BBS12Q6ZW61 710 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 FNDC5Q8NAU1 212 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 GPR152Q8TDT2 470 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 GAS2L1Q99501 681 aaPredicted RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 DAB1O75553 588 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ERBB2P04626 1255 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 MIIPQ5JXC2 388 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ATAT1Q5SQI0 421 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 MAB21L3Q8N8X9 362 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 DHX33Q9H6R0 707 aaKnown RBP18.81■□□□□ 0.6
PCDH1-201ENST00000287008 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.81■□□□□ 0.6
PCDH1-201ENST00000287008 PLK1P53350 603 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 IRF8Q02556 426 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 POM121L1PQ3SYA9 428 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ATP13A4Q4VNC1 1196 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 PAGE2BQ5JRK9 111 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 TSHZ1Q6ZSZ6 1077 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 TCP10LQ8TDR4 215 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 C12orf42Q96LP6 360 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 STK39Q9UEW8 545 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 TNPO3Q9Y5L0 923 aaKnown RBP18.81■□□□□ 0.6
PCDH1-201ENST00000287008 SEC22BO75396 215 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 SPATA31D3P0C874 917 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 GPR15P49685 360 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 CDK7P50613 346 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 RPL7AP62424 266 aaKnown RBP18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ZBTB17Q13105 803 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 SPATA31D4Q6ZUB0 917 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ZCCHC9Q8N567 271 aaKnown RBP18.81■□□□□ 0.6
PCDH1-201ENST00000287008 MRPL45Q9BRJ2 306 aaKnown RBP18.81■□□□□ 0.6
PCDH1-201ENST00000287008 MIR1-1HGQ9H1L0 117 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ARMC7Q9H6L4 198 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF510Q9Y2H8 683 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 RASSF10A6NK89 507 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 SNTNA6NMZ2 147 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 CHADO15335 359 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 FGF19O95750 216 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 APOA1P02647 267 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ZSCAN5DPP0CG00 497 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF23P17027 643 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 TRIM69Q86WT6 500 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 USP6NLQ92738 828 aa18.81■□□□□ 0.6
PCDH1-201ENST00000287008 QSOX1O00391 747 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 NDUFB5O43674 189 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF682O95780 498 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 GSNP06396 782 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ANXA5P08758 320 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 GOT1P17174 413 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ECM1Q16610 540 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 TMC3Q7Z5M5 1100 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 RPAINQ86UA6 219 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 NKAPQ8N5F7 415 aaKnown RBP18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ELMO1Q92556 727 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 APOPT1Q96IL0 206 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 BBS4Q96RK4 519 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 KRT84Q9NSB2 600 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 SNX8Q9Y5X2 465 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 SOWAHBA6NEL2 793 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 VGLL3A8MV65 326 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 PHGDHO43175 533 aaKnown RBP18.8■□□□□ 0.6
PCDH1-201ENST00000287008 GSTM1P09488 218 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 SMPD1P17405 629 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 PRKCZQ05513 592 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 GPR158Q5T848 1215 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 DEPDC1Q5TB30 811 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 LNX1Q8TBB1 728 aaPredicted RBP18.8■□□□□ 0.6
PCDH1-201ENST00000287008 THAP11Q96EK4 314 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 MAGED4Q96JG8 741 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ASB2Q96Q27 587 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 TBC1D14Q9P2M4 693 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 DEC1Q9P2X7 70 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF112Q9UJU3 913 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 C1orf232A0A0U1RR37 186 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 KPNA5O15131 536 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 CLK1P49759 484 aaKnown RBP18.8■□□□□ 0.6
PCDH1-201ENST00000287008 FAAP100Q0VG06 881 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 RASA2Q15283 850 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 NPNTQ6UXI9 565 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 CXorf40BQ96DE9 158 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ZBTB10Q96DT7 871 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 EXOC2Q96KP1 924 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ARHGAP28Q9P2N2 729 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 VTI1BQ9UEU0 232 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms