RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 RAD23AP54725 363 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 SLC25A11Q02978 314 aaKnown RBP13.07□□□□□ -0.32
HERC6-202ENST00000273960 PIGFQ07326 219 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 KCNJ8Q15842 424 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ADRM1Q16186 407 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 PIGGQ5H8A4 983 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 CLIP4Q8N3C7 705 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 APOL2Q9BQE5 337 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MSTO1Q9BUK6 570 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 CDH19Q9H159 772 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MIR1-1HGQ9H1L0 117 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 TPK1Q9H3S4 243 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 NOL6Q9H6R4 1146 aaKnown RBP13.07□□□□□ -0.32
HERC6-202ENST00000273960 CISHQ9NSE2 258 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 COX16Q9P0S2 106 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 TK2O00142 265 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 BIRC5O15392 142 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 GLRA3O75311 464 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 ALDH3B2P48448 385 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 DGKDQ16760 1214 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 KCTD8Q6ZWB6 473 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 TTC16Q8NEE8 873 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 PDZD8Q8NEN9 1154 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 DHRS1Q96LJ7 313 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 CPXM1Q96SM3 734 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 DGCR6LQ9BY27 220 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
HERC6-202ENST00000273960 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 GABBR1Q9UBS5 961 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 RGS17Q9UGC6 210 aaPredicted RBP13.06□□□□□ -0.32
HERC6-202ENST00000273960 CYTH4Q9UIA0 394 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 JAK1P23458 1154 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 TNFSF9P41273 254 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 HSPA13P48723 471 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 DSG4Q86SJ6 1040 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 PQLC3Q8N755 202 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 TMC2Q8TDI7 906 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 CANT1Q8WVQ1 401 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 CNDP1Q96KN2 507 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 MRIQ9BWK5 157 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 CEP44Q9C0F1 390 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 GTSE1Q9NYZ3 720 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 TMED5Q9Y3A6 229 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
HERC6-202ENST00000273960 A0A087WXM4 84 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 ZNF195O14628 629 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 FPGSQ05932 587 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ZFP1Q6P2D0 407 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 CHSY3Q70JA7 882 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ATP6V0A1Q93050 837 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 PIWIL1Q96J94 861 aaKnown RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 SNX27Q96L92 541 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 NLRP4Q96MN2 994 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ADNPQ9H2P0 1102 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 HIPK3Q9H422 1215 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 CDY2AQ9Y6F7 541 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ATP6AP2A0A1C7CYW4 349 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 PHGDHO43175 533 aaKnown RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 ATP6AP2O75787 350 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 BCL10O95999 233 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 C1QAP02745 245 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 PABPC1P11940 636 aaKnown RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 TSPAN8P19075 237 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 NR4A2P43354 598 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ADAM17P78536 824 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 TRPC3Q13507 836 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ZBED5Q49AG3 693 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 BORAQ6PGQ7 559 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 IGFN1Q86VF2 1251 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 CPB2Q96IY4 423 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 SLC45A3Q96JT2 553 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 EBNA1BP2Q99848 306 aaKnown RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 ADPGKQ9BRR6 497 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 EFCAB1Q9HAE3 211 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 FAM49BQ9NUQ9 324 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 DNAJC28Q9NX36 388 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 PAK5Q9P286 719 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 MFHAS1Q9Y4C4 1052 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 PRSS51A0A1B0GVH4 220 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 C4BPAP04003 597 aaKnown RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 PSME3P61289 254 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 OTUD3Q5T2D3 398 aaPredicted RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 KIAA2013Q8IYS2 634 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 SCAIQ8N9R8 606 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 SGCDQ92629 289 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms