RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RPL21P46778 160 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 RFX3P48380 749 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ELF3P78545 371 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SLC20A2Q08357 652 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 INSCQ1MX18 579 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 HLA-DQA1Q5Y7H0 255 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ISLR2Q6UXK2 745 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM169Q96HH4 297 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CAPN10Q9HC96 672 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PPP2R3BQ9Y5P8 575 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 URODP06132 367 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 IL12AP29459 219 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PBLDP30039 288 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 MAPK8P45983 427 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 OAZ1P54368 228 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 FCGRTP55899 365 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 IRAK1BP1Q5VVH5 260 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 CYP20A1Q6UW02 462 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 STK32CQ86UX6 486 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 COQ6Q9Y2Z9 468 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SH3GLB1Q9Y371 365 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 A0A096LPK6 155 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 MLYCDO95822 493 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF846Q147U1 533 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TAF13Q15543 124 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ALG11Q2TAA5 492 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 FBXO47Q5MNV8 452 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PDCD10Q9BUL8 212 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM165Q9HC07 324 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 MYOZ2Q9NPC6 264 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PLA2G4CQ9UP65 541 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ITGAVP06756 1048 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ARF5P84085 180 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PTSQ03393 145 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 RRP1BQ14684 758 aaKnown RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 FGD3Q5JSP0 725 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 FBXO42Q6P3S6 717 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 TMC7Q7Z402 723 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 RP1L1Q8IWN7 2480 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 SFRP1Q8N474 314 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 ZFP28Q8NHY6 868 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 PRCCQ92733 491 aaPredicted RBP8.1□□□□□ -1.11
LIMD1-201ENST00000273317 LENG9Q96B70 501 aa8.1□□□□□ -1.11
LIMD1-201ENST00000273317 H3BNX3 289 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SGTAO43765 313 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SEC22BO75396 215 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ERBB2P04626 1255 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 FGRP09769 529 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DSG3P32926 999 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 RPL5P46777 297 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 POLR2LP62875 67 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 LAMTOR4Q0VGL1 99 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TROAPQ12815 778 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 MTM1Q13496 603 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 USP49Q70CQ1 688 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF410Q86VK4 478 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 COMMD2Q86X83 199 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SPPL2AQ8TCT8 520 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CORO1CQ9ULV4 474 aaPredicted RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SNX6Q9UNH7 406 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SIK3Q9Y2K2 1263 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SQORQ9Y6N5 450 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 AKAP3O75969 853 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ZSWIM7Q19AV6 140 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CCDC185Q8N715 623 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DCUN1D5Q9BTE7 237 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SPAG4Q9NPE6 437 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 OPTCQ9UBM4 332 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CCDC162PA2VCL2 907 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CYP1A2P05177 515 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TGFB3P10600 412 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ACO1P21399 889 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DGKAP23743 735 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CCT3P49368 545 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 MAPK10P53779 464 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SLC25A24Q6NUK1 477 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 EIF3MQ7L2H7 374 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 GLT6D1Q7Z4J2 308 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 MILR1Q7Z6M3 343 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 NKAPQ8N5F7 415 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF614Q8N883 585 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CMTM6Q9NX76 183 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 LEF1Q9UJU2 399 aaPredicted RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 RIMS1Q86UR5 1692 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 NEURL4Q96JN8 1562 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ARHGAP23Q9P227 1491 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TTLL13PA6NNM8 815 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SEC24AO95486 1093 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 NTSR2O95665 410 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CREMQ03060 361 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 STARD3Q14849 445 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TAF5Q15542 800 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ELOVL4Q9GZR5 314 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 UXTQ9UBK9 157 aaPredicted RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DIP2CQ9Y2E4 1556 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 GSAPA4D1B5 854 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms