RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 DNAJC3Q13217 504 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 JAMLQ86YT9 394 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 TRAPPC5Q8IUR0 188 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 PARP9Q8IXQ6 854 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CATSPER1Q8NEC5 780 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 C3orf14Q9HBI5 128 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 NDRG2Q9UN36 371 aaKnown RBP13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 NOVA2Q9UNW9 492 aaKnown RBP13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 KRT87PA6NCN2 255 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CILPO75339 1184 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 TRIM16O95361 564 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ADH5P11766 374 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SYN1P17600 705 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 KRT4P19013 534 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 PBLDP30039 288 aaPredicted RBP13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CLCN6P51797 869 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SMTNL2Q2TAL5 461 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ZC3H12AQ5D1E8 599 aaKnown RBP13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 DNAAF5Q86Y56 855 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 OXR1Q8N573 874 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CCDC185Q8N715 623 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 FNIP1Q8TF40 1166 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CD101Q93033 1021 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SCLYQ96I15 445 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 NDOR1Q9UHB4 597 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC24A2Q9UI40 661 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 EFR3BQ9Y2G0 817 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC27A5Q9Y2P5 690 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 KLHL33A6NCF5 533 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 MGAT4DA6NG13 374 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 RHPN2P1A8MT19 583 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 EPHX1P07099 455 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 NRIP1P48552 1158 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 EMC10Q5UCC4 262 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CDCA2Q69YH5 1023 aaPredicted RBP13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM45BPQ6NSW5 357 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 CERS6Q6ZMG9 384 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC47A2Q86VL8 602 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM71AQ8IYT1 594 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ZSWIM2Q8NEG5 633 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM45AQ8TCE6 357 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC2A11Q9BYW1 496 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 GABRQQ9UN88 632 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 HNRNPCL2B2RXH8 293 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ATG7O95352 703 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 STX3Q13277 289 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ERP44Q9BS26 406 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 SCML1Q9UN30 329 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 ACOT9Q9Y305 439 aa13.65□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM170AA1A519 330 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ITGA8P53708 1063 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 UGCGQ16739 394 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNF783Q6ZMS7 281 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 GALNT13Q8IUC8 556 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 CSPG4P5Q96PW8 444 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 SIKE1Q9BRV8 207 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 DDX47Q9H0S4 455 aaKnown RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ELOVL6Q9H5J4 265 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 E2F6O75461 281 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 KCNA3P22001 575 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 IL10P22301 178 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 GPR17Q13304 367 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNF556Q9HAH1 456 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 NCKIPSDQ9NZQ3 722 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 CHORDC1Q9UHD1 332 aaPredicted RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 STXBP5LQ9Y2K9 1186 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 SNAI1O95863 264 aaPredicted RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 LPOP22079 712 aaPredicted RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 GPC1P35052 558 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 SLC5A3P53794 718 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 LAPTM5Q13571 262 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 CCDC153Q494R4 210 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ARMC3Q5W041 872 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 C16orf89Q6UX73 402 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 TFAP2DQ7Z6R9 452 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 GKN2Q86XP6 184 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 BBS7Q8IWZ6 715 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 RBFAQ8N0V3 343 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 FAM174AQ8TBP5 190 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 NEK6Q9HC98 313 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 RPRD1BQ9NQG5 326 aaKnown RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 CORO1CQ9ULV4 474 aaPredicted RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 DTNAQ9Y4J8 743 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNF217O75362 1048 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 CYP1A2P05177 515 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 GDI1P31150 447 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 HNRNPH1P31943 449 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms