RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SPPL3Q8TCT6 385 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 CENPTQ96BT3 561 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 CHMP6Q96FZ7 201 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 LBHD1Q9BQE6 289 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 MLPHQ9BV36 600 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 INTS9Q9NV88 658 aaKnown RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 IPO11Q9UI26 975 aaKnown RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 TRHDEQ9UKU6 1024 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 MAD1L1Q9Y6D9 718 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 C2orf71A6NGG8 1288 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 RASA4BC9J798 803 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 MATN3O15232 486 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 RASA4O43374 803 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 GABRR2P28476 465 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 SLC22A17Q8WUG5 538 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 PLD4Q96BZ4 506 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 VAT1Q99536 393 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 STMN4Q9H169 189 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 EIF2B3Q9NR50 452 aaKnown RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 MAFFQ9ULX9 164 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 J3KR12 359 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 GJA1P17302 382 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 OR1E1P30953 314 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 PPP3CCP48454 512 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 SLC11A2P49281 568 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 SGSHP51688 502 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 NDST2P52849 883 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 SESN2P58004 480 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-201ENST00000254816 ZNF33AQ06730 810 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 C9orf50Q5SZB4 431 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 C6orf89Q6UWU4 347 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 GAREM2Q75VX8 874 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 MGARPQ8TDB4 240 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 MICAL1Q8TDZ2 1067 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 EMILIN2Q9BXX0 1053 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 PLAC1Q9HBJ0 212 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 XAB2Q9HCS7 855 aaKnown RBP19.29■□□□□ 0.68
TRIM47-201ENST00000254816 ZC3H7BQ9UGR2 993 aaKnown RBP19.29■□□□□ 0.68
TRIM47-201ENST00000254816 ZFP37Q9Y6Q3 630 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-201ENST00000254816 CHD5Q8TDI0 1954 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 CHD9Q3L8U1 2897 aa19.29■□□□□ 0.68
TRIM47-201ENST00000254816 CPP00450 1065 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 IRS1P35568 1242 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 SARNPP82979 210 aaKnown RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 ZXDBP98169 803 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 TMED2Q15363 201 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 TTC31Q49AM3 519 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 ITPRIPL1Q6GPH6 555 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 LRRC8BQ6P9F7 803 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 MRPL43Q8N983 215 aaKnown RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 SPATA22Q8NHS9 363 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 ZFRQ96KR1 1074 aaKnown RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 TLR9Q9NR96 1032 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 EURLQ9NYK6 297 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 AGO1Q9UL18 857 aaKnown RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 TCRBV9S1A1TA0A576 114 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 CCL16O15467 120 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 TSPAN3O60637 253 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 CDH16O75309 829 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 ZNF189O75820 626 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 HLA-DQB2P05538 268 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 MGAT1P26572 445 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 RPS24P62847 133 aaKnown RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 CDK16Q00536 496 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 TMC8Q8IU68 726 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 CACNA2D3Q8IZS8 1091 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 OR52K1Q8NGK4 314 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 ARHGEF2Q92974 986 aaKnown RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 OXNAD1Q96HP4 312 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 PRICKLE1Q96MT3 831 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 ZNF317Q96PQ6 595 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-201ENST00000254816 IL12RB2Q99665 862 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 APOL2Q9BQE5 337 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 CDH23Q9H251 3354 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 MIA3Q5JRA6 1907 aa19.28■□□□□ 0.68
TRIM47-201ENST00000254816 AP2A1O95782 977 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 GLUD1P00367 558 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 ACVRL1P37023 503 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 CBLBQ13191 982 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 LRRC14Q15048 493 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 GKAP1Q5VSY0 366 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 TAOK1Q7L7X3 1001 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 PRPF39Q86UA1 669 aaKnown RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 CABS1Q96KC9 395 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 LRRC3Q9BY71 257 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 ACSS3Q9H6R3 686 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 RBM22Q9NW64 420 aaKnown RBP eCLIP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 LZTS1Q9Y250 596 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 IRAK3Q9Y616 596 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 GRM6O15303 877 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 RAMP2O60895 175 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 MT-CYBP00156 380 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 HDCP19113 662 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 SMAD3P84022 425 aaKnown RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 POLD3Q15054 466 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 STXBP5Q5T5C0 1151 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 KCTD11Q693B1 232 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 TIGD7Q6NT04 549 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 CCDC149Q6ZUS6 474 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 YTHDF3Q7Z739 585 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms