RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 MTTPP55157 894 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 MAP7D1Q3KQU3 841 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 VPS39Q96JC1 886 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 TMEM79Q9BSE2 394 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 ELP3Q9H9T3 547 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 TRPC7Q9HCX4 862 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 KIAA1217Q5T5P2 1943 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 PMPCBO75439 489 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 RXRBP28702 533 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 EPHX2P34913 555 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 MPP1Q00013 466 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 PLOD1Q02809 727 aaPredicted RBP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 KCTD2Q14681 263 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 KCTD21Q4G0X4 260 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 AGKQ53H12 422 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 MTMR10Q9NXD2 777 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 EVPLQ92817 2033 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 RGSL1A5PLK6 1076 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 AKAP10O43572 662 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 CLIC3O95833 236 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 MT-ND1P03886 318 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 PRKCGP05129 697 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 FAM58BPP0C7Q3 252 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 PABPC4LP0CB38 370 aaKnown RBP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 SERPINB8P50452 374 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 DBN1Q16643 649 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 TBC1D25Q3MII6 688 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 KBTBD6Q86V97 674 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 HSPBAP1Q96EW2 488 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 QKIQ96PU8 341 aaKnown RBP eCLIP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 EIF2AQ9BY44 585 aaKnown RBP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 NOL11Q9H8H0 719 aaKnown RBP17.18■□□□□ 0.34
SGPP1-201ENST00000247225 ATXN10Q9UBB4 475 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 NUDT5Q9UKK9 219 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 NME7Q9Y5B8 376 aa17.18■□□□□ 0.34
SGPP1-201ENST00000247225 RNASEH2AO75792 299 aaKnown RBP17.17■□□□□ 0.34
SGPP1-201ENST00000247225 UGT1A6P19224 532 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 ME2P23368 584 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 SLC12A2P55011 1212 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 MAP3K7CLP57077 242 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 SEMA5AQ13591 1074 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 PGM2L1Q6PCE3 622 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 B3GNT6Q6ZMB0 384 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 PIGZQ86VD9 579 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 SIX6OS1Q8N1H7 587 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 OR9I1Q8NGQ6 314 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 PDCD6IPQ8WUM4 868 aaKnown RBP17.17■□□□□ 0.34
SGPP1-201ENST00000247225 AFG1LQ8WV93 481 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 LENG1Q96BZ8 264 aaPredicted RBP17.17■□□□□ 0.34
SGPP1-201ENST00000247225 NXNL1Q96CM4 212 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 COQ10BQ9H8M1 238 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 XPR1Q9UBH6 696 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 PSMC3P17980 439 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 NFKB1P19838 968 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 DPP6P42658 865 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 RPL14P50914 215 aaKnown RBP17.17■□□□□ 0.34
SGPP1-201ENST00000247225 GHRHRQ02643 423 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 CSHL1Q14406 222 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 ITPRIPL1Q6GPH6 555 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 LRRC8BQ6P9F7 803 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 EPGNQ6UW88 154 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 NT5DC4Q86YG4 428 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 KLHL32Q96NJ5 620 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 CYP3A43Q9HB55 503 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 TMEM165Q9HC07 324 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 FNDC3AQ9Y2H6 1198 aaKnown RBP17.17■□□□□ 0.34
SGPP1-201ENST00000247225 PCDHB12Q9Y5F1 795 aa17.17■□□□□ 0.34
SGPP1-201ENST00000247225 ARHGEF37A1IGU5 675 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 TIPRLO75663 272 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 MT-CYBP00156 380 aaPredicted RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ASLP04424 464 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ZFXP17010 805 aaPredicted RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ERCC2P18074 760 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 TPSB2P20231 275 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 IGFBP6P24592 240 aaPredicted RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 MYBPC1Q00872 1141 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 PPIDQ08752 370 aaKnown RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 TPSAB1Q15661 275 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 C16orf89Q6UX73 402 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ELMO2Q96JJ3 720 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 LRRC40Q9H9A6 602 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 DNAJC28Q9NX36 388 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ANKRD31Q8N7Z5 1873 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ZNF839A8K0R7 811 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 VILLO15195 856 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 SLC4A1P02730 911 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 TFPTP0C1Z6 253 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 PPP1R3AQ16821 1122 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 TRIM67Q6ZTA4 783 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 LDB1Q86U70 411 aaPredicted RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 LRRC43Q8N309 656 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 EMID1Q96A84 441 aaPredicted RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 OSMRQ99650 979 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms