RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MAK16Q9BXY0 300 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 SIK2Q9H0K1 926 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 DHX35Q9H5Z1 703 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 OLA1Q9NTK5 396 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 LMCD1Q9NZU5 365 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 MRPS23Q9Y3D9 190 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 E7ESA3 106 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 PPP3CCP48454 512 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 GEMIN4P57678 1058 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 MGAT5Q09328 741 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 EIF4EBP2Q13542 120 aaPredicted RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 RTL10Q7L3V2 364 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 FBXO36Q8NEA4 188 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 SPOCK2Q92563 424 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 PGAP3Q96FM1 320 aaPredicted RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 RMDN2Q96LZ7 410 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 PITPNM3Q9BZ71 974 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 PHACTR1Q9C0D0 580 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 AP4E1Q9UPM8 1137 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 SMG5Q9UPR3 1016 aaKnown RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 FAM72CH0Y354 149 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 ADRA1BP35368 520 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 LTBRP36941 435 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 SLC18A1P54219 525 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 EPHA5P54756 1037 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 SLC1A5Q15758 541 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 BBS9Q3SYG4 887 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 PRSS36Q5K4E3 855 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FAM72AQ5TYM5 149 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FAM72DQ6L9T8 149 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 ZC3H18Q86VM9 953 aaKnown RBP17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FAM72BQ86X60 149 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FITM2Q8N6M3 262 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 CCDC63Q8NA47 563 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 ATP11CQ8NB49 1132 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FBF1Q8TES7 1133 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FCRL2Q96LA5 508 aaPredicted RBP17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 CDX2Q99626 313 aaPredicted RBP17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 PPCSQ9HAB8 311 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 CD248Q9HCU0 757 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 SENP1Q9P0U3 644 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 FZD10Q9ULW2 581 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 CCL26Q9Y258 94 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 TLR6Q9Y2C9 796 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 CPQQ9Y646 472 aa17.37■□□□□ 0.37
CDKN1A-201ENST00000244741 TYROBPO43914 113 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 F9P00740 461 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 CCR1P32246 355 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 BASP1P80723 227 aaKnown RBP17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 SPARCL1Q14515 664 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 DARS2Q6PI48 645 aaKnown RBP17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 TMEM184AQ6ZMB5 413 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 DENND4CQ5VZ89 1909 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 VCANP13611 3396 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 H3BQ06 376 aaPredicted RBP17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 CREB3O43889 395 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 MGRN1O60291 552 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 CA4P22748 312 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 PHBP35232 272 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 NCALDP61601 193 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 BNIP1Q12981 228 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 DNAJC3Q13217 504 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 NOMO1Q15155 1222 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 GET4Q7L5D6 327 aaPredicted RBP17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 TBC1D1Q86TI0 1168 aaPredicted RBP17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 IGDCC3Q8IVU1 814 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 KCTD15Q96SI1 283 aaPredicted RBP17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 PLCD4Q9BRC7 762 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 ACSS3Q9H6R3 686 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 ECT2Q9H8V3 914 aa17.36■□□□□ 0.37
CDKN1A-201ENST00000244741 PAGE1O75459 146 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 SRGAP2BP0DMP2 458 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 TUBP50607 506 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 KRT81Q14533 505 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 SKIV2LQ15477 1246 aaKnown RBP17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 TRIP4Q15650 581 aaPredicted RBP17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 BOLA3Q53S33 107 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 C1orf228Q6PIY5 440 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 ADGRD1Q6QNK2 874 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 GPR149Q86SP6 731 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 PALM2Q8IXS6 379 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 PDIK1LQ8N165 341 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 GRAMD1AQ96CP6 724 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 SLC39A13Q96H72 371 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 ZFRQ96KR1 1074 aaKnown RBP17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 CDK5RAP1Q96SZ6 601 aaKnown RBP17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 DHRS4Q9BTZ2 278 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 MTMR10Q9NXD2 777 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 FETUBQ9UGM5 382 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 TRAV19A0A0A6YYK7 116 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 KRT4P19013 534 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 SP100P23497 879 aaPredicted RBP17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 IL4RP24394 825 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 STIP1P31948 543 aaKnown RBP17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 L1CAMP32004 1257 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 SNCBQ16143 134 aa17.35■□□□□ 0.37
CDKN1A-201ENST00000244741 CTC1Q2NKJ3 1217 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms