RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	NEU2	Q9Y3R4	380 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	BCLAF3	A2AJT9	711 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	ECI2	O75521	394 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	ETS1	P14921	441 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	PSMC3	P17980	439 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	SLC7A5	Q01650	507 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	GNA12	Q03113	381 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	PPID	Q08752	370 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	AP1B1	Q10567	949 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	CDH18	Q13634	790 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	POLD3	Q15054	466 aa	Predicted RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	SMAD2	Q15796	467 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	GAB4	Q2WGN9	574 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	C6orf118	Q5T5N4	469 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	ASTL	Q6HA08	431 aa	Predicted RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	C8orf74	Q6P047	294 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	BZW1	Q7L1Q6	419 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	SETD3	Q86TU7	594 aa	Predicted RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	JAML	Q86YT9	394 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	FAM71D	Q8N9W8	422 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	TFB1M	Q8WVM0	346 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	SLCO2A1	Q92959	643 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	ARHGEF2	Q92974	986 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	TRIM51	Q9BSJ1	452 aa		18.18	■□□□□ 0.5
SPIN3-238	ENST00000640421	ILVBL	A1L0T0	632 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	PPP1R12A	O14974	1030 aa	Predicted RBP	18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	NCAM2	O15394	837 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	CYBB	P04839	570 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	RHOC	P08134	193 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	RHOXF2B	P0C7M4	288 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	MX2	P20592	715 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	MZF1	P28698	734 aa	Predicted RBP	18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	PARP15	Q460N3	678 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	RNF219	Q5W0B1	726 aa	Predicted RBP	18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	ATPAF2	Q8N5M1	289 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	ALG14	Q96F25	216 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	LMLN	Q96KR4	655 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	RHOXF2	Q9BQY4	288 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	PHF7	Q9BWX1	381 aa	Predicted RBP	18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	DONSON	Q9NYP3	566 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	DMGDH	Q9UI17	866 aa	Known RBP	18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421	OR51B4	Q9Y5P0	310 aa		18.17	■□□□□ 0.5
SPIN3-238	ENST00000640421		J3KR12	359 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	SGK1	O00141	431 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	KCNK1	O00180	336 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	TRIM24	O15164	1050 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	KCNN4	O15554	427 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ZSCAN5DP	P0CG00	497 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	GLDC	P23378	1020 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	CD70	P32970	193 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	SERINC3	Q13530	473 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	DHX34	Q14147	1143 aa	Known RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	TRIP13	Q15645	432 aa	Predicted RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ERCC6L	Q2NKX8	1250 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	MTSS1L	Q765P7	747 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	C12orf40	Q86WS4	652 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	CDKL3	Q8IVW4	592 aa	Predicted RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	NAT16	Q8N8M0	369 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	FIBIN	Q8TAL6	211 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ATP2A3	Q93084	1043 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	CEP41	Q9BYV8	373 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	MAGEH1	Q9H213	219 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	THG1L	Q9NWX6	298 aa	Known RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	HACD1	B0YJ81	288 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ARNTL	O00327	626 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ECEL1	O95672	775 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	PEX11B	O96011	259 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ADH5	P11766	374 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	HLA-F	P30511	346 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	CSK	P41240	450 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	YBEY	P58557	167 aa	Predicted RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	LMAN2	Q12907	356 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	PDGFRL	Q15198	375 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	MAFA	Q8NHW3	353 aa	Predicted RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	HTR3C	Q8WXA8	447 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	TSGA13	Q96PP4	275 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	FEM1A	Q9BSK4	669 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ECT2	Q9H8V3	914 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	GTSE1	Q9NYZ3	720 aa		18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	IPO11	Q9UI26	975 aa	Known RBP	18.16	■□□□□ 0.5
SPIN3-238	ENST00000640421	ARHGAP42	A6NI28	874 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	NFATC1	O95644	943 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	IFNB1	P01574	187 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	GDI1	P31150	447 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	CLCN6	P51797	869 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	WASHC5	Q12768	1159 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	ZBTB17	Q13105	803 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	HEATR6	Q6AI08	1181 aa	Known RBP	18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	LEKR1	Q6ZMV7	388 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	GSTA5	Q7RTV2	222 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	APCDD1	Q8J025	514 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	MYRIP	Q8NFW9	859 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	CCDC26	Q8TAB7	109 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	TTC8	Q8TAM2	541 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	RTP4	Q96DX8	246 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	CHFR	Q96EP1	664 aa		18.15	■□□□□ 0.5
SPIN3-238	ENST00000640421	ACE2	Q9BYF1	805 aa	Predicted RBP	18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms