RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MAP9Q49MG5 647 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TMEM196Q5HYL7 178 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 EARS2Q5JPH6 523 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CEP85LQ5SZL2 805 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MANEALQ5VSG8 457 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CCSAPQ6IQ19 270 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MRNIPQ6NTE8 343 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RINT1Q6NUQ1 792 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 DHRS13Q6UX07 377 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SYNE3Q6ZMZ3 975 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RTL10Q7L3V2 364 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TRAPPC11Q7Z392 1133 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 UBE2Q1Q7Z7E8 422 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 C11orf96Q7Z7L8 435 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 DPP9Q86TI2 863 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CCDC117Q8IWD4 279 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CCDC28AQ8IWP9 274 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 UEVLDQ8IX04 471 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 OR2C3Q8N628 320 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 METTL25Q8N6Q8 603 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 C12orf76Q8N812 135 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ATG16L2Q8NAA4 619 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ZNF527Q8NB42 609 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 GLIS1Q8NBF1 620 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC44A5Q8NCS7 719 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RUBCNQ92622 972 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PIGKQ92643 395 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TRIM63Q969Q1 353 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 KIAA1191Q96A73 305 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MSI2Q96DH6 328 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RSPRY1Q96DX4 576 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 LTV1Q96GA3 475 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 HIC2Q96JB3 615 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MSLNLQ96KJ4 702 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PRPF18Q99633 342 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ELAC2Q9BQ52 826 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 EIF2AQ9BY44 585 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PCGF6Q9BYE7 350 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SEZ6LQ9BYH1 1024 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TRIM2Q9C040 744 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 NUAK2Q9H093 628 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 DHX36Q9H2U1 1008 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PRDM16Q9HAZ2 1276 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ARNT2Q9HBZ2 717 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ZBTB26Q9HCK0 441 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 DDX21Q9NR30 783 aaKnown RBP eCLIP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 FBXO28Q9NVF7 368 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RGL1Q9NZL6 768 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 NCKIPSDQ9NZQ3 722 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 LRFN1Q9P244 771 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MYO1AQ9UBC5 1043 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 DKK4Q9UBT3 224 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 IPO11Q9UI26 975 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC39A10Q9ULF5 831 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RIMKLBQ9ULI2 386 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC8A2Q9UPR5 921 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 DAAM1Q9Y4D1 1078 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MMP24Q9Y5R2 645 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RGPD3A6NKT7 1758 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 KDM3BQ7LBC6 1761 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RGPD4Q7Z3J3 1758 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 LMO7Q8WWI1 1683 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 THSD7AQ9UPZ6 1657 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 NEXMIFQ5QGS0 1516 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 ERVK-7P63135 1459 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TCOF1Q13428 1488 aaKnown RBP1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 DLG5Q8TDM6 1919 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3DA0A087WVF3 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3IA0A087WXS9 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3EA0A087X179 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3KA0A087X1G2 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 A0A0B4J293 547 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 RPS10-NUDT3A0A1W2PQS6 291 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 ANO9A1A5B4 782 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 DPPA5A6NC42 116 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3BA6NDS4 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3FA6NER0 549 aaPredicted RBP1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 SMTNL1A8MU46 457 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 A8MVJ9 347 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3LB9A6J9 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 RASA4BC9J798 803 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 HNRNPDLO14979 420 aaKnown RBP1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 RASA4O43374 803 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TLX3O43711 291 aaPredicted RBP1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 PRAMEF2O60811 474 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 FGF18O76093 207 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBX6O95947 436 aaPredicted RBP1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 UMODP07911 640 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 TBC1D3HP0C7X1 549 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 SETSIPP0DME0 302 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 GYS1P13807 737 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC5A1P13866 664 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 PKMP14618 531 aaKnown RBP1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 ST6GAL1P15907 406 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 EGR1P18146 543 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 MMP8P22894 467 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 CIITAP33076 1130 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 MCM5P33992 734 aa1.25□□□□□ -2.21
SMARCB1-209ENST00000635578 DGKQP52824 942 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms