RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 IGDCC3Q8IVU1 814 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 SCUBE3Q8IX30 993 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 ULK2Q8IYT8 1036 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 PPM1NQ8N819 430 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 RBM15BQ8NDT2 890 aaKnown RBP18.04■□□□□ 0.48
PCF11-207ENST00000624931 ZMIZ2Q8NF64 920 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 DTX3LQ8TDB6 740 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 ACMSDQ8TDX5 336 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 NDRG1Q92597 394 aaKnown RBP18.04■□□□□ 0.48
PCF11-207ENST00000624931 JADE3Q92613 823 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 DTNBP1Q96EV8 351 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 OLFM3Q96PB7 478 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 ECSITQ9BQ95 431 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 COLEC11Q9BWP8 271 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 ZDHHC7Q9NXF8 308 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 ZC3H7BQ9UGR2 993 aaKnown RBP18.04■□□□□ 0.48
PCF11-207ENST00000624931 PTPRDP23468 1912 aa18.04■□□□□ 0.48
PCF11-207ENST00000624931 BCLAF3A2AJT9 711 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 ZNF487B1APH4 448 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 XPO1O14980 1071 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 APOEP02649 317 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 C1QAP02745 245 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 ENO1P06733 434 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 SYN1P17600 705 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 PAX3P23760 479 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 YWHAZP63104 245 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 HNRNPDQ14103 355 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 SMTNL2Q2TAL5 461 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 TEX44Q53QW1 395 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 FAM171BQ6P995 826 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 RIPOR1Q6ZS17 1223 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 FAM43BQ6ZT52 329 aaPredicted RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 GPRIN1Q7Z2K8 1008 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 TMEM110Q86TL2 294 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 WDR75Q8IWA0 830 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 CTAGE3PQ8IX95 158 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 THEM5Q8N1Q8 247 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 KCNK16Q96T55 309 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 CNPY3Q9BT09 278 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 C12orf65Q9H3J6 166 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 ETAA1Q9NY74 926 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 H7C0C1 242 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 BPGMP07738 259 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 BDNFP23560 247 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 ATP5OP48047 213 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 ZNF143P52747 638 aaPredicted RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 ADIGQ0VDE8 80 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 STX3Q13277 289 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 CHI3L2Q15782 390 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 RAB6CQ53S08 254 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 KCNT1Q5JUK3 1230 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 RTP2Q5QGT7 225 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 PRPF39Q86UA1 669 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 ALYREFQ86V81 257 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 ARID3BQ8IVW6 561 aaPredicted RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 CENPKQ9BS16 269 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 VN1R3Q9BXE9 311 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 CALN1Q9BXU9 219 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 RAB6CQ9H0N0 254 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 RC3H2Q9HBD1 1191 aaKnown RBP18.03■□□□□ 0.48
PCF11-207ENST00000624931 VCX3AQ9NNX9 186 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 SOX13Q9UN79 622 aa18.03■□□□□ 0.48
PCF11-207ENST00000624931 SF3B1O75533 1304 aaKnown RBP eCLIP18.02■□□□□ 0.482e-6■■□□□ 11.5
PCF11-207ENST00000624931 KIAA1671Q9BY89 1806 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 RFPL1O75677 317 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 LYNP07948 512 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 DESP17661 470 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 AMPD1P23109 780 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 NDUFV1P49821 464 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 CLCN2P51788 898 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 TSPY1Q01534 308 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 SLC39A12Q504Y0 691 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 BOLA3Q53S33 107 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 SPOUT1Q5T280 376 aaKnown RBP18.02■□□□□ 0.48
PCF11-207ENST00000624931 TTC7BQ86TV6 843 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 HSPH1Q92598 858 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 KHSRPQ92945 711 aaKnown RBP eCLIP18.02■□□□□ 0.487e-10■■□□□ 11.4
PCF11-207ENST00000624931 ZNF689Q96CS4 500 aaPredicted RBP18.02■□□□□ 0.48
PCF11-207ENST00000624931 CFAP36Q96G28 342 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 PRR11Q96HE9 360 aaPredicted RBP18.02■□□□□ 0.48
PCF11-207ENST00000624931 RNF157Q96PX1 679 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 POPDC2Q9HBU9 364 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 DMAP1Q9NPF5 467 aaPredicted RBP18.02■□□□□ 0.48
PCF11-207ENST00000624931 RAB6BQ9NRW1 208 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 NDUFA13Q9P0J0 144 aa18.02■□□□□ 0.48
PCF11-207ENST00000624931 HBS1LQ9Y450 684 aaKnown RBP18.02■□□□□ 0.48
PCF11-207ENST00000624931 MRPL42Q9Y6G3 142 aaKnown RBP18.02■□□□□ 0.48
PCF11-207ENST00000624931 ARHGEF37A1IGU5 675 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 EIF4E1BA6NMX2 242 aaKnown RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 OAZ2O95190 189 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 RTN3O95197 1032 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 PIM1P11309 404 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 GPD1P21695 349 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 FGFR3P22607 806 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 RPL34P49207 117 aaKnown RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 AQP5P55064 265 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 NAB1Q13506 487 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms