RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ARHGAP36Q6ZRI8 547 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 MFSD6LQ8IWD5 586 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 YAF2Q8IY57 180 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 FAM71DQ8N9W8 422 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 DEPDC1BQ8WUY9 529 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 ELSPBP1Q96BH3 223 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 HDAC11Q96DB2 347 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 ASIC4Q96FT7 647 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 ZFYVE19Q96K21 471 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 TRIM51Q9BSJ1 452 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 PLA2G2FQ9BZM2 168 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 EPS15L1Q9UBC2 864 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 TBC1D30Q9Y2I9 924 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 C5orf42Q9H799 3197 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 ILVBLA1L0T0 632 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 FAM187AA6NFU0 413 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 IFNB1P01574 187 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 VAV1P15498 845 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 GDF10P55107 478 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 PPIDQ08752 370 aaKnown RBP18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 GRM2Q14416 872 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 HEATR6Q6AI08 1181 aaKnown RBP18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 CXorf57Q6NSI4 855 aaKnown RBP18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 RHBDF2Q6PJF5 856 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 MTSS1LQ765P7 747 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 LRRC49Q8IUZ0 686 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 CCDC89Q8N998 374 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 OR52K2Q8NGK3 314 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 FGF14Q92915 247 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 MAGEH1Q9H213 219 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 USP29Q9HBJ7 922 aa18.24■□□□□ 0.51
PTCHD3-202ENST00000622555 ECI2O75521 394 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 PENKP01210 267 aaPredicted RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 CYP17A1P05093 508 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 ARSAP15289 507 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 PSMC3P17980 439 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 STIP1P31948 543 aaKnown RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 ACVRL1P37023 503 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 CLCN6P51797 869 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 PDGFRLQ15198 375 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 DHCR24Q15392 516 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 TRIP13Q15645 432 aaPredicted RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 FSCBQ5H9T9 825 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 RNF219Q5W0B1 726 aaPredicted RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 SYDE1Q6ZW31 735 aaPredicted RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 CCDC13Q8IYE1 715 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 OR7D4Q8NG98 312 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 WFDC5Q8TCV5 224 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 HTR3CQ8WXA8 447 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 FERMT1Q9BQL6 677 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 MUC3BQ9H195 1237 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 EBF3Q9H4W6 596 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 FAM53CQ9NYF3 392 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 MARK1Q9P0L2 795 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 SEPT10Q9P0V9 454 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 A0A0D9SEW6 157 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 HEXIM1O94992 359 aaKnown RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 NFATC1O95644 943 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 ADH1CP00326 375 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 KRT14P02533 472 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 TYRP14679 529 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 NUMBP49757 651 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 FCHO2Q0JRZ9 810 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 RNF43Q68DV7 783 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 PRUNE1Q86TP1 453 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 ARHGEF2Q92974 986 aaKnown RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 TSGA13Q96PP4 275 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 HINFPQ9BQA5 517 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 FAM83CQ9BQN1 747 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 SPON2Q9BUD6 331 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 EPC1Q9H2F5 836 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 ZNF446Q9NWS9 450 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 DMGDHQ9UI17 866 aaKnown RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 IPO11Q9UI26 975 aaKnown RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 CLEC4EQ9ULY5 219 aa18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 MYO18AQ92614 2054 aaKnown RBP18.23■□□□□ 0.51
PTCHD3-202ENST00000622555 MAFKO60675 156 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ZNF189O75820 626 aaPredicted RBP18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ADH5P11766 374 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ETS1P14921 441 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 CCNCP24863 283 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ETFBP38117 255 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 NRLP54845 237 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 SERINC3Q13530 473 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 PTK6Q13882 451 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 IL31Q6EBC2 164 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ZNF783Q6ZMS7 281 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 GLIS1Q8NBF1 620 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 FIBINQ8TAL6 211 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 RAB17Q9H0T7 212 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 SP110Q9HB58 689 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ATP13A1Q9HD20 1204 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 ASIC3Q9UHC3 531 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 UTP11Q9Y3A2 253 aaKnown RBP18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 NEU2Q9Y3R4 380 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 NUMBLQ9Y6R0 609 aa18.22■□□□□ 0.51
PTCHD3-202ENST00000622555 C2CD4DB7Z1M9 353 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 KCNK1O00180 336 aa18.21■□□□□ 0.51
PTCHD3-202ENST00000622555 MTSS1O43312 755 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms