RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TBC1D3L	B9A6J9	549 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	PSMA7	O14818	248 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CETN3	O15182	167 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	SLC16A3	O15427	465 aa	Known RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	ADH1B	P00325	375 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TBC1D3H	P0C7X1	549 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	THEGL	P0DJG4	465 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	MAT2A	P31153	395 aa	Known RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	GTF2H1	P32780	548 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CD70	P32970	193 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	NUDT1	P36639	197 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	VAMP7	P51809	220 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	KIF11	P52732	1056 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	RIPPLY3	P57055	190 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	ZNF445	P59923	1031 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	STIM1	Q13586	685 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	STAT4	Q14765	748 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TGIF1	Q15583	401 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CAMK4	Q16566	473 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TBR1	Q16650	682 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CEP135	Q66GS9	1140 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TBC1D3G	Q6DHY5	549 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	ISM2	Q6H9L7	571 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TBC1D3C	Q6IPX1	549 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	SV2A	Q7L0J3	742 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	PRPF39	Q86UA1	669 aa	Known RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	FAM186B	Q8IYM0	893 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	C12orf29	Q8N999	325 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	GPT2	Q8TD30	523 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	MED15	Q96RN5	788 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TSG101	Q99816	390 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	FUCA2	Q9BTY2	467 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CAAP1	Q9H8G2	361 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	MARCH2	Q9P0N8	246 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	ARHGAP20	Q9P2F6	1191 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CYTH4	Q9UIA0	394 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	CA5B	Q9Y2D0	317 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	PCDHGA4	Q9Y5G9	962 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	TDRD6	O60522	2096 aa	Known RBP	10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	ICE1	Q9Y2F5	2266 aa		10.68	□□□□□ -0.7
RRP12-215	ENST00000622320	UTP20	O75691	2785 aa	Known RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	BIN1	O00499	593 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	ASS1	P00966	412 aa	Known RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	C5AR1	P21730	350 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	HARS2	P49590	506 aa	Known RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	SGSH	P51688	502 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	NDST1	P52848	882 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	PDX1	P52945	283 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	MARS	P56192	900 aa	Known RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	PPP3CA	Q08209	521 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	CLCA4	Q14CN2	919 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	POM121L1P	Q3SYA9	428 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	ZNF667	Q5HYK9	610 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	C9orf64	Q5T6V5	341 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	GUSBP11	Q6P575	273 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	CRTC1	Q6UUV9	634 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	RSRC2	Q7L4I2	434 aa	Known RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	TAF4B	Q92750	862 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	ELMO3	Q96BJ8	720 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	KLHDC7B	Q96G42	594 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	LIN37	Q96GY3	246 aa	Predicted RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	CEP63	Q96MT8	703 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	KLHL11	Q9NVR0	708 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	COQ4	Q9Y3A0	265 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	ABCA12	Q86UK0	2595 aa		10.67	□□□□□ -0.7
RRP12-215	ENST00000622320	ZFC3H1	O60293	1989 aa	Known RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	C2CD3	Q4AC94	2353 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	DOCK9	Q9BZ29	2069 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	BICDL2	A1A5D9	508 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	PRAMEF26	H0Y7S4	382 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320		K7ESM1	405 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	PMM2	O15305	246 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	NOBOX	O60393	691 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	PHACTR2	O75167	634 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	TCEA3	O75764	348 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ASL	P04424	464 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	EPB41	P11171	864 aa	Known RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	SLC5A2	P31639	672 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	DRD3	P35462	400 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	CASR	P41180	1078 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	KCNMA1	Q12791	1236 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ZNF177	Q13360	481 aa	Predicted RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	NCOA4	Q13772	614 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ARID5B	Q14865	1188 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	TRIP4	Q15650	581 aa	Predicted RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	CDKN3	Q16667	212 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	SGSM1	Q2NKQ1	1148 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	SETMAR	Q53H47	684 aa	Predicted RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	EFL1	Q7Z2Z2	1120 aa	Known RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	C14orf80	Q86SX3	495 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	VASH2	Q86V25	355 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	TRIM69	Q86WT6	500 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	JAML	Q86YT9	394 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	MLKL	Q8NB16	471 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms