RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SRGAP2O75044 1071 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 ZNF217O75362 1048 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 ZNF821O75541 412 aaPredicted RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 MTA2O94776 668 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 EPN2O95208 641 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 MOCS3O95396 460 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 CD160O95971 181 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 EPHX1P07099 455 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 TMEM253P0C7T8 217 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 HLA-EP13747 358 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 PSMA2P25787 234 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 MIPP30301 263 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 HCAR3P49019 387 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 ADKP55263 362 aaKnown RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 ZBTB16Q05516 673 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 BYSLQ13895 437 aaKnown RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 STARD3Q14849 445 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 CCDC122Q5T0U0 273 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 RNF219Q5W0B1 726 aaPredicted RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 PMS2CLQ68D20 193 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 SERPINA13PQ6UXR4 307 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 TMPRSS6Q8IU80 811 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 PYROXD2Q8N2H3 581 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 SH2D3CQ8N5H7 860 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 FRMD1Q8N878 549 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 DCAF4L2Q8NA75 395 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 HMGB4Q8WW32 186 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 VOPP1Q96AW1 172 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 FAM129BQ96TA1 746 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 TPSD1Q9BZJ3 242 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 KLC2Q9H0B6 622 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 NOL6Q9H6R4 1146 aaKnown RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 NHEJ1Q9H9Q4 299 aaPredicted RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 PRDM16Q9HAZ2 1276 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 UVRAGQ9P2Y5 699 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 PCDHGA5Q9Y5G8 931 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 TNRC6BQ9UPQ9 1833 aaKnown RBP8.47□□□□□ -1.05
NEK3-209ENST00000618856 EDDM13A0A1B0GTR0 161 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 TTC34A8MYJ7 566 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 SYNCRIPO60506 623 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 SIN3BO75182 1162 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 RHOCP08134 193 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 TPM1P09493 284 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 BCKDHBP21953 392 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 IL1R2P27930 398 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 OR1E1P30953 314 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 STK19P49842 368 aaPredicted RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 ZNF135P52742 658 aaPredicted RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 RPS14P62263 151 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 ARF5P84085 180 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 SLC25A11Q02978 314 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 GNA12Q03113 381 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 SLC20A2Q08357 652 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 PIGHQ14442 188 aaPredicted RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 DPYSL2Q16555 572 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 CA9Q16790 459 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 FNDC3BQ53EP0 1204 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 EFHC2Q5JST6 749 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 ERMARDQ5T6L9 678 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 AFMIDQ63HM1 303 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 TFAP2DQ7Z6R9 452 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 UMODL1-AS1Q8N2C9 162 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 RTL3Q8N8U3 475 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 TEKT4Q8WW24 435 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 ARHGEF2Q92974 986 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 TBC1D31Q96DN5 1066 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 ZNF419Q96HQ0 510 aaPredicted RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 CCDC42Q96M95 316 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 PANX2Q96RD6 677 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 C2orf49Q9BVC5 232 aaPredicted RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 NUP85Q9BW27 656 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 PACSIN1Q9BY11 444 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 SLC6A17Q9H1V8 727 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 MAGEH1Q9H213 219 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 PARD6AQ9NPB6 346 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 CD93Q9NPY3 652 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 ZNHIT6Q9NWK9 470 aaKnown RBP8.46□□□□□ -1.06
NEK3-209ENST00000618856 MYO1AQ9UBC5 1043 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 IP6K2Q9UHH9 426 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 LCMT1Q9UIC8 334 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 VPS51Q9UID3 782 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 VPS28Q9UK41 221 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 INTUQ9ULD6 942 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 USP18Q9UMW8 372 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 SCML1Q9UN30 329 aa8.46□□□□□ -1.06
NEK3-209ENST00000618856 NYNRINQ9P2P1 1898 aaKnown RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 BCLAF3A2AJT9 711 aaKnown RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 ALOX15BO15296 676 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 FGF10O15520 208 aaPredicted RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 SNAP91O60641 907 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 RNF8O76064 485 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 RHOBTB1O94844 696 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 PROSCO94903 275 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 MT-CO1P00395 513 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 H2AFZP0C0S5 128 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 SRCP12931 536 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 TCF4P15884 667 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms