RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 SEPT10Q9P0V9 454 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 KLHL8Q9P2G9 620 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 XPO7Q9UIA9 1087 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 ACSL4O60488 711 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 SASH3O75995 380 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 HNRNPA1P09651 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 MBL2P11226 248 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 ETS1P14921 441 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.341e-33■■■□□ 17.3
TRAPPC3-210ENST00000617904 ATP5DP30049 168 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 GARSP41250 739 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 GDF10P55107 478 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 YBEYP58557 167 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 SLC10A2Q12908 348 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 AUHQ13825 339 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 MS4A13Q5J8X5 152 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 MANEALQ5VSG8 457 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 SUGP1Q8IWZ8 645 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 CNPY4Q8N129 248 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 P2RY11Q96G91 374 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 TSGA13Q96PP4 275 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 PPCSQ9HAB8 311 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 XAB2Q9HCS7 855 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 TMEM248Q9NWD8 314 aa17.2■□□□□ 0.34
TRAPPC3-210ENST00000617904 KMT2EQ8IZD2 1858 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 SOBPA7XYQ1 873 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ERI2A8K979 691 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 RNF103O00237 685 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 DFFAO00273 331 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 COCHO43405 550 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 SPAG6O75602 509 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 TBX18O95935 607 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 NUDT17P0C025 328 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 TSHRP16473 764 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 TPSB2P20231 275 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ETFBP38117 255 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 TPSAB1Q15661 275 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ANKRD20A2Q5SQ80 823 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ANKRD20A1Q5TYW2 823 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ANKRD20A3Q5VUR7 823 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 LILRA6Q6PI73 481 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 PID1Q7Z2X4 250 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 BBS5Q8N3I7 341 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 C12orf76Q8N812 135 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 CPT1BQ92523 772 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZIM3Q96PE6 472 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 PHOX2BQ99453 314 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ROPN1BQ9BZX4 212 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ROPN1Q9HAT0 212 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 TRPC7Q9HCX4 862 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 SAYSD1Q9NPB0 183 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 ANLNQ9NQW6 1124 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 VANGL2Q9ULK5 521 aa17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-210ENST00000617904 WDFY4Q6ZS81 3184 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 TRAV19A0A0A6YYK7 116 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 C2CD4DB7Z1M9 353 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 MAP3K6O95382 1288 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 TTC4O95801 387 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 EPCAMP16422 314 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 PTPN2P17706 415 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 HDCP19113 662 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 TACR2P21452 398 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 GABRR2P28476 465 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 HOXA9P31269 272 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 GGCXP38435 758 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 MAGEA4P43358 317 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 PGFP49763 221 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 TCF15Q12870 199 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 PARP15Q460N3 678 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 CEP85LQ5SZL2 805 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 RAP1GAP2Q684P5 730 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 CES5AQ6NT32 575 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZNF354CQ86Y25 554 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 UMODL1-AS1Q8N2C9 162 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 NAT8LQ8N9F0 302 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 MCUQ8NE86 351 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 SLC22A17Q8WUG5 538 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 PRCCQ92733 491 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 LGMNQ99538 433 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 MAGEB5Q9BZ81 275 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 EIF2B3Q9NR50 452 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZDBF2Q9HCK1 2354 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 IGLV3-10A0A075B6K4 115 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 A0A087WUV0 522 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 DRGXA6NNA5 263 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 HMGB1P1B2RPK0 211 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 RIPK2O43353 540 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 OAS1P00973 400 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 F11P03951 625 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 APRTP07741 180 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 MTHFRP42898 656 aa17.17■□□□□ 0.34
TRAPPC3-210ENST00000617904 MAGEA6P43360 314 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms