RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MIB1Q86YT6 1006 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 COLGALT1Q8NBJ5 622 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ADAMTS18Q8TE60 1221 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CDHR5Q9HBB8 845 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PCDH18Q9HCL0 1135 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 FGFR1OP2Q9NVK5 253 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 AAR2Q9Y312 384 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 FKBP7Q9Y680 259 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ADAMTS9Q9P2N4 1935 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 A0A087X0B3 334 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TMEM221A6NGB7 291 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 M0R296 226 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 FLRT2O43155 660 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 H2AFZP0C0S5 128 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 KIR2DL3P43628 341 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CLCN2P51788 898 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZNF132P52740 706 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TBX4P57082 545 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 H2AFVQ71UI9 128 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TRAPPC5Q8IUR0 188 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 STMN2Q93045 179 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NKD1Q969G9 470 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PHF7Q9BWX1 381 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 LSM14BQ9BX40 385 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 HDHD5Q9BXW7 423 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NRDE2Q9H7Z3 1164 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 OSGEPQ9NPF4 335 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 GTF2IRD1Q9UHL9 959 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 R3HDM2Q9Y2K5 976 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 EDDM13A0A1B0GTR0 161 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SLC12A8A0AV02 714 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TIMM44O43615 452 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 HOXA13P31271 388 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 ADAM9Q13443 819 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 HGSNATQ68CP4 663 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SLC44A2Q8IWA5 706 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 PLEKHA8Q96JA3 519 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 POLR1BQ9H9Y6 1135 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NECTIN3Q9NQS3 549 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TAS2R14Q9NYV8 317 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 GCNT4Q9P109 453 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SHROOM3Q8TF72 1996 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 VGLL3A8MV65 326 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SMIM10L2AP0DMW4 78 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SMIM10L2BP0DMW5 78 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZNF7P17097 686 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 TBL3Q12788 808 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 PTP4A2Q12974 167 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 KIF19Q2TAC6 998 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ATXN7L2Q5T6C5 722 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 FHL5Q5TD97 284 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 HIBCHQ6NVY1 386 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 IKBIPQ70UQ0 350 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NUP93Q8N1F7 819 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 RNASE11Q8TAA1 199 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 C18orf8Q96DM3 657 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZDHHC12Q96GR4 267 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CLMNQ96JQ2 1002 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 LENG8Q96PV6 779 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 PRDM16Q9HAZ2 1276 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 BTBD7Q9P203 1132 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZNHIT2Q9UHR6 403 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CYB561D2O14569 222 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 AMPD1P23109 780 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 IL12BP29460 328 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 RPA3P35244 121 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 CXADRP78310 365 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 DARS2Q6PI48 645 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 FAM192AQ9GZU8 254 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 WWP1Q9H0M0 922 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 RBM47A0AV96 593 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 C3orf70A6NLC5 250 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 PLOD2O00469 737 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 RPN1P04843 607 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 RPS6KB1P23443 525 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CSE1LP55060 971 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 VITQ6UXI7 678 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ANKRD49Q8WVL7 239 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SSH1Q8WYL5 1049 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 DYDC2Q96IM9 177 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ADI1Q9BV57 179 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ASB7Q9H672 318 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TMCO1Q9UM00 188 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 MYLKQ15746 1914 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SNX4O95219 450 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 FTLP02792 175 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 DUSP28Q4G0W2 176 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZC3H12BQ5HYM0 836 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 REP15Q6BDI9 236 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 MCRS1Q96EZ8 462 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CHCHD3Q9NX63 227 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 ESPNB1AK53 854 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SLC26A3P40879 764 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 OVGP1Q12889 678 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 UGT2A3Q6UWM9 527 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SNX31Q8N9S9 440 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 EXT2Q93063 718 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CLDN4O14493 209 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TP53I11O14683 189 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms