RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	KIAA1211L	Q6NV74	962 aa		18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	RTL3	Q8N8U3	475 aa	Known RBP	18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	MDGA1	Q8NFP4	955 aa		18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	KCTD15	Q96SI1	283 aa	Predicted RBP	18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	SLC25A13	Q9UJS0	675 aa		18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	PCDHA13	Q9Y5I0	950 aa		18.87	■□□□□ 0.61
CADM1-222	ENST00000616271		R4GN57	208 aa		18.87	■□□□□ 0.61
CADM1-222	ENST00000616271	EEF2K	O00418	725 aa	Known RBP	18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	ZBTB24	O43167	697 aa	Predicted RBP	18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	SYNCRIP	O60506	623 aa	Known RBP	18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	TCF4	P15884	667 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	GABRG2	P18507	467 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	ARHGAP25	P42331	645 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	GNA12	Q03113	381 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	CAMK2G	Q13555	558 aa	Predicted RBP	18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	DPYSL2	Q16555	572 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	RAD9B	Q6WBX8	426 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	HMGB4	Q8WW32	186 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	PSMB7	Q99436	277 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	SEMA4A	Q9H3S1	761 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	ZWILCH	Q9H900	591 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	FBRS	Q9HAH7	460 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	NDFIP2	Q9NV92	336 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	DONSON	Q9NYP3	566 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	SUN2	Q9UH99	717 aa		18.86	■□□□□ 0.61
CADM1-222	ENST00000616271	THADA	Q6YHU6	1953 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271		A0A0D9SEW6	157 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	PROB1	E7EW31	1015 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	RARA	P10276	462 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	HLA-E	P13747	358 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	NNMT	P40261	264 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	HADHB	P55084	474 aa	Known RBP	18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	MESD	Q14696	234 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	SMTNL2	Q2TAL5	461 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	OR7D4	Q8NG98	312 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	RPL10L	Q96L21	214 aa	Known RBP	18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	TPSD1	Q9BZJ3	242 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	MAGEH1	Q9H213	219 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	DNAI1	Q9UI46	699 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271	VPS51	Q9UID3	782 aa		18.85	■□□□□ 0.61
CADM1-222	ENST00000616271		A0A0A6YYK5	440 aa	Predicted RBP	18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	RAMP2	O60895	175 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	GOT1	P17174	413 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	NDUFV2	P19404	249 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	SSR1	P43307	286 aa	Known RBP	18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	HCAR3	P49019	387 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	NUMB	P49757	651 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	STK19	P49842	368 aa	Predicted RBP	18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	KCNT1	Q5JUK3	1230 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	TXNRD3NB	Q6F5E7	133 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	RFX8	Q6ZV50	586 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	ZNF366	Q8N895	744 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	GAB3	Q8WWW8	586 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	HSPH1	Q92598	858 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	ATP13A1	Q9HD20	1204 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	HS3ST2	Q9Y278	367 aa		18.84	■□□□□ 0.61
CADM1-222	ENST00000616271	EDDM13	A0A1B0GTR0	161 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	CXorf51A	A0A1B0GTR3	108 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	TMEM110-MUSTN1	A8MSY1	372 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271		H3BRJ5	948 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	SNAP91	O60641	907 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	ARL4A	P40617	200 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	COPA	P53621	1224 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	YBEY	P58557	167 aa	Predicted RBP	18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	CPNE8	Q86YQ8	564 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	UMODL1-AS1	Q8N2C9	162 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	PGBD3	Q8N328	593 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	SH2D3C	Q8N5H7	860 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	OR2T3	Q8NH03	318 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	ARHGEF2	Q92974	986 aa	Known RBP	18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	MRGPRX1	Q96LB2	322 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	ACE2	Q9BYF1	805 aa	Predicted RBP	18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	EPC1	Q9H2F5	836 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	PRSS16	Q9NQE7	514 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	CWC15	Q9P013	229 aa	Known RBP	18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	SLCO3A1	Q9UIG8	710 aa		18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	REXO2	Q9Y3B8	237 aa	Known RBP	18.83	■□□□□ 0.6
CADM1-222	ENST00000616271	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	TARSL2	A2RTX5	802 aa	Known RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	TTC34	A8MYJ7	566 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	DAPK3	O43293	454 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	ATP9B	O43861	1147 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	RPP40	O75818	363 aa	Known RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	KRT7	P08729	469 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	C7	P10643	843 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	VAV2	P52735	878 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	TAS2R40	P59535	323 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	POLD3	Q15054	466 aa	Predicted RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	USP39	Q53GS9	565 aa	Known RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	IL31	Q6EBC2	164 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	RETSAT	Q6NUM9	610 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	POLN	Q7Z5Q5	900 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	ACRBP	Q8NEB7	543 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	FAM71B	Q8TC56	605 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	ERLEC1	Q96DZ1	483 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms