RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 STK10O94804 968 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 LDHAP00338 332 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 ZNF23P17027 643 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 AXLP30530 894 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 SERPINB9P50453 376 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 MPP3Q13368 585 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 DPYSL3Q14195 570 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 PDCD4Q53EL6 469 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 TIFABQ6ZNK6 161 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 NCCRP1Q6ZVX7 275 aaPredicted RBP22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 TMEM199Q8N511 208 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 FAM84AQ96KN4 292 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 SERPINI1Q99574 410 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 RTKNQ9BST9 563 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 PI4K2AQ9BTU6 479 aa22.42■■□□□ 1.18
POLR2J3-220ENST00000613744 LAMA2P24043 3122 aaKnown RBP22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 CCDC195A0A1B0GUA6 201 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 OGTO15294 1046 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 FBXO21O94952 628 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 WNT7BP56706 349 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 NUP107P57740 925 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 RPL7AP62424 266 aaKnown RBP22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 DENND5BQ6ZUT9 1274 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 PPM1NQ8N819 430 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 LINC01599Q8WXQ3 324 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 SLC35B4Q969S0 331 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 PRPF18Q99633 342 aaKnown RBP22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 SLC2A11Q9BYW1 496 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 NXF3Q9H4D5 531 aaKnown RBP22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 STK39Q9UEW8 545 aa22.41■■□□□ 1.18
POLR2J3-220ENST00000613744 LSM8O95777 96 aaKnown RBP22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 KRT7P08729 469 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 ATP6V1B1P15313 513 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 KCNJ11Q14654 390 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 FSCBQ5H9T9 825 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 LMBRD2Q68DH5 695 aaPredicted RBP22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 DNAJC24Q6P3W2 148 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 HPS6Q86YV9 775 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 RNF169Q8NCN4 708 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 SEPT8Q92599 483 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 C20orf27Q9GZN8 174 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 RNF19AQ9NV58 838 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 ITM2AO43736 263 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 CXCL10P02778 98 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 ALDH3B2P48448 385 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 BASP1P80723 227 aaKnown RBP22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 DSC3Q14574 896 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 SMYD5Q6GMV2 418 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 SNRNP27Q8WVK2 155 aaKnown RBP22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 CCDC124Q96CT7 223 aaKnown RBP22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 ZNF395Q9H8N7 513 aaPredicted RBP22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 VPS28Q9UK41 221 aa22.4■■□□□ 1.18
POLR2J3-220ENST00000613744 F8VP50 259 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 SUPT3HO75486 399 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 TBXAS1P24557 533 aaPredicted RBP22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 AKAP5P24588 427 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 CNTFP26441 200 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 GABRB2P47870 512 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 CUL2Q13617 745 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 POTEHQ6S545 545 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 CTAGE3PQ8IX95 158 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 PPP1R14CQ8TAE6 165 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 DLG3Q92796 817 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 LRRC39Q96DD0 335 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 KLC2Q9H0B6 622 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 RNF39Q9H2S5 420 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 CHST12Q9NRB3 414 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 SNTG2Q9NY99 539 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 DNAJC16Q9Y2G8 782 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 PCDHB4Q9Y5E5 795 aa22.39■■□□□ 1.17
POLR2J3-220ENST00000613744 MEIS3P2A8K0S8 358 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 H3BSA7 217 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 CST8O60676 142 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 ZACNQ401N2 412 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 TEDDM1Q5T9Z0 273 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 PDPK2PQ6A1A2 396 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 DCUN1D2Q6PH85 259 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 POU5F2Q8N7G0 328 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 LPPQ93052 612 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 CNBD2Q96M20 576 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 OSBPL6Q9BZF3 934 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 FAM105AQ9NUU6 356 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 RIMS3Q9UJD0 308 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 IPPQ9Y573 584 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 E2F6O75461 281 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 PARNO95453 639 aaKnown RBP22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 CFHP08603 1231 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 MCF2P10911 925 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 TNNI1P19237 187 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 GRK2P25098 689 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 MBLAC2Q68D91 279 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 UNC45BQ8IWX7 931 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 SMG8Q8ND04 991 aaKnown RBP22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 ACMSDQ8TDX5 336 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 TFB1MQ8WVM0 346 aaKnown RBP22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 HSPBAP1Q96EW2 488 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF518BQ9C0D4 1074 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 CXCL16Q9H2A7 254 aa22.38■■□□□ 1.17
POLR2J3-220ENST00000613744 CPSF3Q9UKF6 684 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms