RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TUBA1BP68363 451 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADAM17P78536 824 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 COG7P83436 770 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 MYBPC1Q00872 1141 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PPARDQ03181 441 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZBTB16Q05516 673 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 NSUN2Q08J23 767 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 HSPA14Q0VDF9 509 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 STX3Q13277 289 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CTTNQ14247 550 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC15A2Q16348 729 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 BMT2Q1RMZ1 405 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 INF2Q27J81 1249 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RGS21Q2M5E4 152 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 LSM12Q3MHD2 195 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PARP10Q53GL7 1025 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 BOLA3Q53S33 107 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 IFIT1BQ5T764 474 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 C1orf146Q5VVC0 180 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 IRAK1BP1Q5VVH5 260 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 METTL21CQ5VZV1 264 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DCAF15Q66K64 600 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 NANOGP8Q6NSW7 305 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 LVRNQ6Q4G3 990 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SH2D5Q6ZV89 423 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RAPH1Q70E73 1250 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TUBA1AQ71U36 451 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 EEPD1Q7L9B9 569 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF804AQ7Z570 1209 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 FBXO33Q7Z6M2 555 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 B3GNT8Q7Z7M8 397 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 GPR180Q86V85 440 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 C11orf74Q86VG3 221 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 MMAAQ8IVH4 418 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CENPSQ8N2Z9 138 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC33Q8N5R6 958 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARL10Q8N8L6 244 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SPERTQ8NA61 448 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 OR7G1Q8NGA0 311 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TTLL11Q8NHH1 800 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CEP70Q8NHQ1 597 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RFWD2Q8NHY2 731 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ANGPTL6Q8NI99 470 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 LNX1Q8TBB1 728 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PPP4R1Q8TF05 950 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 U2AF1L4Q8WU68 220 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMEM174Q8WUU8 243 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRPF31Q8WWY3 499 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 STON2Q8WXE9 905 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PSPC1Q8WXF1 523 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ATL1Q8WXF7 558 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 LARP4BQ92615 738 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RAD54LQ92698 747 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZBTB8AQ96BR9 441 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PEX11GQ96HA9 241 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 MED30Q96HR3 178 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 THTPAQ9BU02 230 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 BRIP1Q9BX63 1249 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TSSK1BQ9BXA7 367 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMEM120AQ9BXJ8 343 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 MROQ9BYG7 248 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 YTHDF1Q9BYJ9 559 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 NUF2Q9BZD4 464 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RAB34Q9BZG1 259 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM96AQ9H5X1 160 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DHX33Q9H6R0 707 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DNAJC18Q9H819 358 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC52A2Q9HAB3 445 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 PARVGQ9HBI0 331 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 MAGEE1Q9HCI5 957 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 CD209Q9NNX6 404 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCNQ5Q9NR82 932 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RIC8BQ9NVN3 520 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 HOXC10Q9NYD6 342 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 HACD3Q9P035 362 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 STRIP2Q9ULQ0 834 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC8A2Q9UPR5 921 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ERGIC3Q9Y282 383 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DRG1Q9Y295 367 aaKnown RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 FRMD4BQ9Y2L6 1034 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 TSC22D4Q9Y3Q8 395 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DTNAQ9Y4J8 743 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RGPD8O14715 1765 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 RGPD2P0DJD1 1756 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 DIP2BQ9P265 1576 aa4.19□□□□□ -1.74
HMGB1P50-201ENST00000605814 ANKRD34BA5PLL1 514 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 RSPH10B2B2RC85 870 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 C9IYK1 514 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 H3BNH8 94 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 M0QX08 132 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MCF2LO15068 1137 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PMM2O15305 246 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 SNAP91O60641 907 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MTRF1O75570 445 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRDM1O75626 825 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 STAM2O75886 525 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DGKIO75912 1065 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 FBXO21O94952 628 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PDE8BO95263 885 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PGM3O95394 542 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms