RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PTENP60484 403 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 TTLL9Q3SXZ7 439 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CDC73Q6P1J9 531 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 PROSER1Q86XN7 944 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF671Q8TAW3 534 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CPB2Q96IY4 423 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 E7ENX8 843 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 SCRN3Q0VDG4 424 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ACAP2Q15057 778 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ADGRF2Q8IZF7 708 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CRNNQ9UBG3 495 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 FGFR2P21802 821 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 TAF6P49848 677 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ZC3H10Q96K80 434 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 PLAGL2Q9UPG8 496 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MRPS7Q9Y2R9 242 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 F5H5T6 163 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 GPC1P35052 558 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 SLFN11Q7Z7L1 901 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 RPRD1AQ96P16 312 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 RIT2Q99578 217 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 GSDMCQ9BYG8 508 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 IL25Q9H293 177 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 NYAP2Q9P242 653 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CIDEBQ9UHD4 219 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 DLG5Q8TDM6 1919 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CAPN8A6NHC0 703 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 UBDO15205 165 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 TP73O15350 636 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF286BP0CG31 522 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 SLC9A3P48764 834 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MSL3Q8N5Y2 521 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 FBXO32Q969P5 355 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 FAM237BA0A1B0GVD1 139 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 KLRK1P26718 216 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 BST2Q10589 180 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 PDK2Q15119 407 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CRTC3Q6UUV7 619 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 CARNMT1Q8N4J0 409 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MAN1C1Q9NR34 630 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 GPATCH2LQ9NWQ4 482 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 PADI4Q9UM07 663 aa8.84□□□□□ -0.99
CSMD1-216ENST00000602557 AAR2Q9Y312 384 aaKnown RBP8.84□□□□□ -0.99
CSMD1-216ENST00000602557 MGAT4DA6NG13 374 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 PLA2G6O60733 806 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 ITGA1P56199 1179 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 EFEMP1Q12805 493 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 ZNF605Q86T29 641 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 PHC2Q8IXK0 858 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 PHACTR4Q8IZ21 702 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 CKAP2Q8WWK9 683 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 ANKEF1Q9NU02 776 aa8.84□□□□□ -1
CSMD1-216ENST00000602557 BAZ2AQ9UIF9 1905 aaKnown RBP8.84□□□□□ -1
CSMD1-216ENST00000602557 PNPLA4P41247 253 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 POF1BQ8WVV4 589 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 NACC2Q96BF6 587 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 EHD1Q9H4M9 534 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 H0Y858 1186 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ABCB1P08183 1280 aaPredicted RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 MUTP22033 750 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GARTP22102 1010 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 STIP1P31948 543 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 CCNJLQ8IV13 435 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 AMER2Q8N7J2 671 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 SLC4A11Q8NBS3 891 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GGA3Q9NZ52 723 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 FAM172BPA6NC97 362 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 CPSF4O95639 269 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 ASS1P00966 412 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 USP39Q53GS9 565 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 ITFG1Q8TB96 612 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GPRASP2Q96D09 838 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 NINJ2Q9NZG7 142 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 NUP50Q9UKX7 468 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 MSX2P35548 267 aaPredicted RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 SLC11A2P49281 568 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GEMP55040 296 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 GNASQ5JWF2 1037 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 FRMD7Q6ZUT3 714 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 SFRP1Q8N474 314 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 MAP3K14Q99558 947 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 AP4E1Q9UPM8 1137 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 PCDHGA10Q9Y5H3 936 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 STMND1H3BQB6 276 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 NRP2O60462 931 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 FADS2O95864 444 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 MYL12AP19105 171 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 CYP2B6P20813 491 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ALDH7A1P49419 539 aaKnown RBP8.83□□□□□ -1
CSMD1-216ENST00000602557 CPT1AP50416 773 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 FAAP100Q0VG06 881 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 ZNF276Q8N554 614 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 FAM13CQ8NE31 585 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 CCDC126Q96EE4 140 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 TBCDQ9BTW9 1192 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 MED28Q9H204 178 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 MED24O75448 989 aa8.83□□□□□ -1
CSMD1-216ENST00000602557 EIF2S3P41091 472 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms