RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 AP4E1Q9UPM8 1137 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TRIOO75962 3097 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 TBC1D3BA6NDS4 549 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 ZNF487B1APH4 448 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 E9PAM4 449 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 TULP3O75386 442 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 LUC7L3O95232 432 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 KAT7O95251 611 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ECEL1O95672 775 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 KDELR1P24390 212 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 HOXD9P28356 352 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 L1CAMP32004 1257 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ARL4AP40617 200 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 GRIA2P42262 883 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 CARSP49589 748 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 DRG2P55039 364 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 CDH4P55283 916 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 KDSRQ06136 332 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ZNF177Q13360 481 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 DUPD1Q68J44 220 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 RWDD4Q6NW29 188 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 FBXL22Q6P050 247 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 DRICH1Q6PGQ1 229 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 CYP4V2Q6ZWL3 525 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 CHST9Q7L1S5 443 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ANKS1BQ7Z6G8 1248 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 MAP7D3Q8IWC1 876 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ETFBKMTQ8IXQ9 262 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 GSPT2Q8IYD1 628 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 CCDC105Q8IYK2 499 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 SYNPOQ8N3V7 929 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 CARNMT1Q8N4J0 409 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 CCDC185Q8N715 623 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 NAT16Q8N8M0 369 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 WFIKKN2Q8TEU8 576 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 UCMAQ8WVF2 138 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 PBXIP1Q96AQ6 731 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 PRICKLE1Q96MT3 831 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 PEBP4Q96S96 227 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 PRMT1Q99873 361 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 SNRNP25Q9BV90 132 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 HEMGNQ9BXL5 484 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 FAM129AQ9BZQ8 928 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 ZYG11BQ9C0D3 744 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 DHX35Q9H5Z1 703 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 CATSPERBQ9H7T0 1116 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 VIPAS39Q9H9C1 493 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 KLHL11Q9NVR0 708 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 FAM53CQ9NYF3 392 aa10.35□□□□□ -0.75
UPF1-213ENST00000601981 PPARGC1AQ9UBK2 798 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 FEZ2Q9UHY8 353 aaPredicted RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 NDRG2Q9UN36 371 aaKnown RBP10.35□□□□□ -0.75
UPF1-213ENST00000601981 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 ESYT3A0FGR9 886 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 FAM170BA6NMN3 283 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 GFRA2O00451 464 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 FGF10O15520 208 aaPredicted RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 DAPK3O43293 454 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 CREB3O43889 395 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 SASH3O75995 380 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 ETFBP38117 255 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 OPRD1P41143 372 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TNNT3P45378 269 aaPredicted RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 GALK1P51570 392 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 ARSEP51690 589 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TPI1P60174 286 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 RPS24P62847 133 aaKnown RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 SLC12A1Q13621 1099 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 KRT81Q14533 505 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 CASP8Q14790 479 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 EIF4HQ15056 248 aaKnown RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 PDK2Q15119 407 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 SMTNL2Q2TAL5 461 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 C5orf22Q49AR2 442 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TXNDC11Q6PKC3 985 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 BBS12Q6ZW61 710 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TRMT11Q7Z4G4 463 aaKnown RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 BMP8AQ7Z5Y6 402 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 AHI1Q8N157 1196 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 CFAP52Q8N1V2 620 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TERB1Q8NA31 727 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 KCTD6Q8NC69 237 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 PJA1Q8NG27 643 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 FIBINQ8TAL6 211 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 FAM71BQ8TC56 605 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 C1orf54Q8WWF1 131 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 IFT81Q8WYA0 676 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 HSPH1Q92598 858 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 CHFRQ96EP1 664 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 TRIM51Q9BSJ1 452 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 IER2Q9BTL4 223 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 ACBD3Q9H3P7 528 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 KIAA1522Q9P206 1035 aaPredicted RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 NFU1Q9UMS0 254 aa10.34□□□□□ -0.75
UPF1-213ENST00000601981 R3HDM2Q9Y2K5 976 aaKnown RBP10.34□□□□□ -0.75
UPF1-213ENST00000601981 SLC27A6Q9Y2P4 619 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms