RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 WHAMMP3Q1A5X7 153 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 GRAMD4Q6IC98 578 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 ADAT2Q7Z6V5 191 aaKnown RBP14.7□□□□□ -0.06
UPF1-211ENST00000600868 RALGPS2Q86X27 583 aaPredicted RBP14.7□□□□□ -0.06
UPF1-211ENST00000600868 RNF135Q8IUD6 432 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 SUGP1Q8IWZ8 645 aaKnown RBP14.7□□□□□ -0.06
UPF1-211ENST00000600868 TP53INP2Q8IXH6 220 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 PHTF2Q8N3S3 785 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 WFIKKN2Q8TEU8 576 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 HMCESQ96FZ2 354 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 MSANTD3Q96H12 275 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 ACE2Q9BYF1 805 aaPredicted RBP14.7□□□□□ -0.06
UPF1-211ENST00000600868 BRD8Q9H0E9 1235 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 MUC3BQ9H195 1237 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 HOMER3Q9NSC5 361 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 ABCB8Q9NUT2 735 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 SAE1Q9UBE0 346 aaPredicted RBP14.7□□□□□ -0.06
UPF1-211ENST00000600868 GGA2Q9UJY4 613 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 NUP205Q92621 2012 aa14.7□□□□□ -0.06
UPF1-211ENST00000600868 TCF20Q9UGU0 1960 aaKnown RBP14.69□□□□□ -0.06
UPF1-211ENST00000600868 KIAA1549LQ6ZVL6 1849 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 SPECC1L-ADORA2AF8WAN1 911 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 DFFAO00273 331 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 PDE2AO00408 941 aaPredicted RBP14.69□□□□□ -0.06
UPF1-211ENST00000600868 CTHP32929 405 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 ACVRL1P37023 503 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 GARSP41250 739 aaKnown RBP14.69□□□□□ -0.06
UPF1-211ENST00000600868 PAPOLAP51003 745 aaKnown RBP14.69□□□□□ -0.06
UPF1-211ENST00000600868 ZNF33AQ06730 810 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 SERINC3Q13530 473 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 CCNG2Q16589 344 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 PLEKHG6Q3KR16 790 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 DNTTIP2Q5QJE6 756 aaKnown RBP14.69□□□□□ -0.06
UPF1-211ENST00000600868 GJD3Q8N144 294 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 AHI1Q8N157 1196 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 OR7D4Q8NG98 312 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 EXOC4Q96A65 974 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 HAUS1Q96CS2 278 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 HDAC11Q96DB2 347 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 TSGA13Q96PP4 275 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 PNKPQ96T60 521 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 HEBP1Q9NRV9 189 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 SMARCAL1Q9NZC9 954 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 VPS28Q9UK41 221 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 R3HDM2Q9Y2K5 976 aaKnown RBP14.69□□□□□ -0.06
UPF1-211ENST00000600868 MRFAP1Q9Y605 127 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 PIAS3Q9Y6X2 628 aa14.69□□□□□ -0.06
UPF1-211ENST00000600868 UNC80Q8N2C7 3258 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 A0A0A0MRY4 1105 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 CXorf51AA0A1B0GTR3 108 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 HACD1B0YJ81 288 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 KRIT1O00522 736 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 PPP1R12AO14974 1030 aaPredicted RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 TRIM24O15164 1050 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 KDELR3O43731 214 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 MAP3K6O95382 1288 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 GRIA2P42262 883 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 SOX9P48436 509 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 EIF3EP60228 445 aaKnown RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 CKAP4Q07065 602 aaKnown RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 PPIDQ08752 370 aaKnown RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 CYP1B1Q16678 543 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 SLC44A4Q53GD3 710 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 PITRM1Q5JRX3 1037 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 TJAP1Q5JTD0 557 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 IL31Q6EBC2 164 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 DRICH1Q6PGQ1 229 aaPredicted RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 ZNF572Q7Z3I7 529 aaPredicted RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 ADIPOR2Q86V24 386 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 UBALD2Q8IYN6 164 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 APCDD1Q8J025 514 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 ATPAF2Q8N5M1 289 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 PRELID2Q8N945 189 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 C12orf50Q8NA57 414 aaPredicted RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 DCAF4L2Q8NA75 395 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 NETO2Q8NC67 525 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 ACDQ96AP0 544 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 P2RY13Q9BPV8 354 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 SPON2Q9BUD6 331 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 C2orf49Q9BVC5 232 aaPredicted RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 ATP13A1Q9HD20 1204 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 INTS6Q9UL03 887 aaKnown RBP14.68□□□□□ -0.06
UPF1-211ENST00000600868 HPCAL4Q9UM19 191 aa14.68□□□□□ -0.06
UPF1-211ENST00000600868 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 ZSCAN5CA6NGD5 496 aaPredicted RBP14.67□□□□□ -0.06
UPF1-211ENST00000600868 MCF2LO15068 1137 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 TIMM44O43615 452 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 LIASO43766 372 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 MAFKO60675 156 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 CCNCP24863 283 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 GALK1P51570 392 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 SULT2A1Q06520 285 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 IL10RBQ08334 325 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 PRKD1Q15139 912 aaPredicted RBP14.67□□□□□ -0.06
UPF1-211ENST00000600868 GEN1Q17RS7 908 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 FUT11Q495W5 492 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 NUDT18Q6ZVK8 323 aa14.67□□□□□ -0.06
UPF1-211ENST00000600868 ZC3H18Q86VM9 953 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms