RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 TRIP4Q15650 581 aaPredicted RBP14.21□□□□□ -0.13
HOMER3-212ENST00000600077 MPP7Q5T2T1 576 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 ZCCHC8Q6NZY4 707 aaKnown RBP14.21□□□□□ -0.13
HOMER3-212ENST00000600077 TRIM69Q86WT6 500 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 PTRH1Q86Y79 214 aaKnown RBP14.21□□□□□ -0.13
HOMER3-212ENST00000600077 FMR1NBQ8N0W7 255 aaPredicted RBP14.21□□□□□ -0.13
HOMER3-212ENST00000600077 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 ZNF516Q92618 1163 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 TTC17Q96AE7 1141 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 ARRDC3Q96B67 414 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 MYO19Q96H55 970 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 IPO9Q96P70 1041 aaKnown RBP14.21□□□□□ -0.13
HOMER3-212ENST00000600077 FAM49BQ9NUQ9 324 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 CHMP5Q9NZZ3 219 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 STOML2Q9UJZ1 356 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 USP3Q9Y6I4 520 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 U3KQA8 63 aa14.21□□□□□ -0.13
HOMER3-212ENST00000600077 RELNP78509 3460 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 K7ESM1 405 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 NOBOXO60393 691 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 SMC2O95347 1197 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 LATS1O95835 1130 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 LIPCP11150 499 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 KRT13P13646 458 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 MAT2AP31153 395 aaKnown RBP14.2□□□□□ -0.14
HOMER3-212ENST00000600077 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 PNOCQ13519 176 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 NFIL3Q16649 462 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 SKIDA1Q1XH10 827 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 MANEAQ5SRI9 462 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 ADGRF1Q5T601 910 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.2□□□□□ -0.14
HOMER3-212ENST00000600077 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 INTS8Q75QN2 995 aaKnown RBP14.2□□□□□ -0.14
HOMER3-212ENST00000600077 DSG4Q86SJ6 1040 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 FAM186BQ8IYM0 893 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 SPATA20Q8TB22 786 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 IMPG2Q9BZV3 1241 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 PCDHGA4Q9Y5G9 962 aa14.2□□□□□ -0.14
HOMER3-212ENST00000600077 ABCA12Q86UK0 2595 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 CPED1A4D0V7 1026 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 EME2A4GXA9 379 aaPredicted RBP14.19□□□□□ -0.14
HOMER3-212ENST00000600077 PLD2O14939 933 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 MAPK13O15264 365 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 IL1BP01584 269 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 SRPRAP08240 638 aaKnown RBP14.19□□□□□ -0.14
HOMER3-212ENST00000600077 CD70P32970 193 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 PSMC2P35998 433 aaKnown RBP14.19□□□□□ -0.14
HOMER3-212ENST00000600077 VAMP7P51809 220 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 NDST1P52848 882 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 HNRNPKP61978 463 aaKnown RBP eCLIP14.19□□□□□ -0.14
HOMER3-212ENST00000600077 DLG4P78352 724 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 CDKN3Q16667 212 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 ZACNQ401N2 412 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 EFL1Q7Z2Z2 1120 aaKnown RBP14.19□□□□□ -0.14
HOMER3-212ENST00000600077 C12orf29Q8N999 325 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 SMARCE1Q969G3 411 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 FAM129BQ96TA1 746 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 SRRTQ9BXP5 876 aaKnown RBP14.19□□□□□ -0.14
HOMER3-212ENST00000600077 TUBD1Q9UJT1 453 aa14.19□□□□□ -0.14
HOMER3-212ENST00000600077 PMS2P1A4D2B8 440 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 TMX2-CTNND1H3BSU7 103 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 IKBKBO14920 756 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 PLRG1O43660 514 aaKnown RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 ADAM9Q13443 819 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 ELAVL3Q14576 367 aaKnown RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 CLCA4Q14CN2 919 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 TGIF1Q15583 401 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 HIST2H2BCQ6DN03 193 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 ATCAYQ86WG3 371 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 JAMLQ86YT9 394 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 SMYD4Q8IYR2 804 aaPredicted RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 FBXO39Q8N4B4 442 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 TMEM145Q8NBT3 493 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 CCDC150Q8NCX0 1101 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 FAM174AQ8TBP5 190 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 TAF4BQ92750 862 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 FAM131CQ96AQ9 280 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 CYFIP2Q96F07 1278 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 MRGPRX3Q96LB0 322 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 TIGD1Q96MW7 591 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 GSDMAQ96QA5 445 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 TSG101Q99816 390 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 GTPBP4Q9BZE4 634 aaKnown RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 DNAI2Q9GZS0 605 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 SDCBP2Q9H190 292 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 OLA1Q9NTK5 396 aaKnown RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 SALL4Q9UJQ4 1053 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 HBS1LQ9Y450 684 aaKnown RBP14.18□□□□□ -0.14
HOMER3-212ENST00000600077 PCDHB11Q9Y5F2 797 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 CSNK1G3Q9Y6M4 447 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 ICE1Q9Y2F5 2266 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 NBASA2RRP1 2371 aa14.18□□□□□ -0.14
HOMER3-212ENST00000600077 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
HOMER3-212ENST00000600077 COL27A1Q8IZC6 1860 aaPredicted RBP14.17□□□□□ -0.14
HOMER3-212ENST00000600077 VNN1O95497 513 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms