RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SLC12A6Q9UHW9 1150 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 IPO11Q9UI26 975 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MRPS23Q9Y3D9 190 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TTLL3Q9Y4R7 772 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.3□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CLUHO75153 1309 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TDRD15B5MCY1 1934 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CFAP69A5D8W1 941 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FOXO6A8MYZ6 492 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RAMP2O60895 175 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TBX10O75333 385 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ACSL3O95573 720 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RHOCP08134 193 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARSAP15289 507 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ITIH2P19823 946 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SP100P23497 879 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MCM3P25205 808 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HOXA9P31269 272 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 BMP8BP34820 402 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SERPINB6P35237 376 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CSKP41240 450 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RGRP47804 291 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPP3CCP48454 512 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KPNA1P52294 538 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZNF135P52742 658 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PMS2P54278 862 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MAXP61244 160 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CRADDP78560 199 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 DSC2Q02487 901 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LMNB2Q03252 620 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 USP4Q13107 963 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CALCOCO2Q13137 446 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 EFTUD2Q15029 972 aaKnown RBP eCLIP6.29□□□□□ -1.41e-323■□□□□ 10.2
RNU4ATAC-201ENST00000580972 ZNF77Q15935 545 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KYNUQ16719 465 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 C5orf22Q49AR2 442 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MAP9Q49MG5 647 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FAM78AQ5JUQ0 283 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ADGRF1Q5T601 910 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RNF219Q5W0B1 726 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TRIM68Q6AZZ1 485 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LINGO4Q6UY18 593 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HTR3DQ70Z44 454 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GET4Q7L5D6 327 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PID1Q7Z2X4 250 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HDXQ7Z353 690 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KDELC2Q7Z4H8 507 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CAND1Q86VP6 1230 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZNF354CQ86Y25 554 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TMEM25Q86YD3 366 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARID3BQ8IVW6 561 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NPAS3Q8IXF0 933 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 APCDD1Q8J025 514 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 UMODL1-AS1Q8N2C9 162 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MICALL1Q8N3F8 863 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PGBD5Q8N414 524 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CARNMT1Q8N4J0 409 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZCCHC9Q8N567 271 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PDCD7Q8N8D1 485 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TDRD5Q8NAT2 981 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARHGEF2Q92974 986 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARL8AQ96BM9 186 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LRRC45Q96CN5 670 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HDAC11Q96DB2 347 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PABPC5Q96DU9 382 aaKnown RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZFYVE19Q96K21 471 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZIM3Q96PE6 472 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LMAN2LQ9H0V9 348 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GBA3Q9H227 469 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZNF576Q9H609 170 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NT5MQ9NPB1 228 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZDHHC7Q9NXF8 308 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CLEC1BQ9P126 229 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RSPH14Q9UHP6 348 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FEZ2Q9UHY8 353 aaPredicted RBP6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 STOML2Q9UJZ1 356 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARHGAP26Q9UNA1 814 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CHMP2BQ9UQN3 213 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PLAAQ9Y263 795 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NFS1Q9Y697 457 aa6.29□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CCDC78A2IDD5 438 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ANTXRLA6NF34 631 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SMIM23A6NLE4 172 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 K7ERQ8 282 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MATN3O15232 486 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RIPK2O43353 540 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PRAMEF11O60813 436 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 OPHN1O60890 802 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MT-CYBP00156 380 aaPredicted RBP6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TUBBP07437 444 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 APRTP07741 180 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CCNB1P14635 433 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TPH1P17752 444 aa6.28□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MX2P20592 715 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms