RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 RIF1Q5UIP0 2472 aaKnown RBP13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SDK1Q7Z5N4 2213 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 THADAQ6YHU6 1953 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 IGLV3-10A0A075B6K4 115 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 IGHV1OR15-9A0A0B4J2B8 117 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 TTC34A8MYJ7 566 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SRPRAP08240 638 aaKnown RBP13.61□□□□□ -0.23
RPAIN-216ENST00000575599 MYBL1P10243 752 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 ACADMP11310 421 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 OR1E1P30953 314 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 PLK1P53350 603 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 RPL6Q02878 288 aaKnown RBP13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SULT2A1Q06520 285 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 CAMK2GQ13555 558 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-216ENST00000575599 EFHC2Q5JST6 749 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 C6orf118Q5T5N4 469 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 LPCAT2Q7L5N7 544 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SLFN11Q7Z7L1 901 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 TMTC1Q8IUR5 882 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 DEFB119Q8N690 84 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 NTAN1Q96AB6 310 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 LOXL4Q96JB6 756 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 MAGEB5Q9BZ81 275 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 TRIM7Q9C029 511 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 ISCUQ9H1K1 167 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 PARD6AQ9NPB6 346 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 ARHGAP20Q9P2F6 1191 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SUN2Q9UH99 717 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SLCO3A1Q9UIG8 710 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SLC25A13Q9UJS0 675 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 TBC1D30Q9Y2I9 924 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 SCINQ9Y6U3 715 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 ABCA7Q8IZY2 2146 aa13.61□□□□□ -0.23
RPAIN-216ENST00000575599 A0A087X0T9 212 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 FAM72CH0Y354 149 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 SIN3BO75182 1162 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 FAM228BP0C875 321 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 MPLP40238 635 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 NNMTP40261 264 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 HNRNPA1L2Q32P51 320 aaKnown RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 ARTNQ5T4W7 220 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 FAM72AQ5TYM5 149 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 FAM72DQ6L9T8 149 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 SLC36A4Q6YBV0 504 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 SETD3Q86TU7 594 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 FAM72BQ86X60 149 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 PYROXD2Q8N2H3 581 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 TBC1D31Q96DN5 1066 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 ALG14Q96F25 216 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 OSBPL2Q9H1P3 480 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 MRPL47Q9HD33 250 aaKnown RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 SEMA4GQ9NTN9 838 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 DOCK4Q8N1I0 1966 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 RALGAPA1Q6GYQ0 2036 aa13.6□□□□□ -0.23
RPAIN-216ENST00000575599 PTPRZ1P23471 2315 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-216ENST00000575599 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 EDDM13A0A1B0GTR0 161 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 TMEM191CA6NGB0 347 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 CREB3O43889 395 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 SNAP91O60641 907 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 NDUFS2O75306 463 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 LRIG2O94898 1065 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 IPO7O95373 1038 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 CD6P30203 668 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 EIF4A3P38919 411 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 PTGER3P43115 390 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 TPMTP51580 245 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 NRG1Q02297 640 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 GFPT1Q06210 699 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF252P-AS1Q0IIN9 211 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 SCAPQ12770 1279 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 ACCSLQ4AC99 568 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 CCDC122Q5T0U0 273 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 MANEALQ5VSG8 457 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 ALKBH5Q6P6C2 394 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 CYP2U1Q7Z449 544 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 FAM124AQ86V42 546 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 GPR161Q8N6U8 529 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 KDM1BQ8NB78 822 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 CCDC42Q96M95 316 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 PSMB7Q99436 277 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 C2orf49Q9BVC5 232 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 FBRSQ9HAH7 460 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 GPATCH2LQ9NWQ4 482 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 USP36Q9P275 1121 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 FZD10Q9ULW2 581 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 PCDHGA5Q9Y5G8 931 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 OR51B4Q9Y5P0 310 aa13.59□□□□□ -0.23
RPAIN-216ENST00000575599 ATXN2Q99700 1313 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 NYNRINQ9P2P1 1898 aaKnown RBP13.59□□□□□ -0.23
RPAIN-216ENST00000575599 LRP3O75074 770 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms