RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GDF9O60383 454 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 RTN2O75298 545 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 FTLP02792 175 aaPredicted RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 SERPING1P05155 500 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 CYP1A2P05177 515 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 EPHX1P07099 455 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 CTSLP07711 333 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SRPRAP08240 638 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 SRCP12931 536 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 FECHP22830 423 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 ECT2LQ008S8 904 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SLC25A11Q02978 314 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 MAPK8IP2Q13387 824 aaPredicted RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 SF3A2Q15428 464 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 CSRP2Q16527 193 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 FNDC3BQ53EP0 1204 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 SPECC1LQ69YQ0 1117 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 PRR23CQ6ZRP0 262 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SETD3Q86TU7 594 aaPredicted RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 TMPRSS6Q8IU80 811 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 KIAA2013Q8IYS2 634 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SH2D3CQ8N5H7 860 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 AADATQ8N5Z0 425 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 OR7D4Q8NG98 312 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 ZNF653Q96CK0 615 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 RMDN1Q96DB5 314 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 IQCDQ96DY2 449 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 RPL10LQ96L21 214 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 SNRNP25Q9BV90 132 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 SELENOOQ9BVL4 669 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 THAP2Q9H0W7 228 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 ARRDC1-AS1Q9H2J1 176 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 ITM2CQ9NQX7 267 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 ABHD10Q9NUJ1 306 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SEPT11Q9NVA2 429 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 TMEM248Q9NWD8 314 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 GPATCH2LQ9NWQ4 482 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 KIAA1522Q9P206 1035 aaPredicted RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 ADAMTS1Q9UHI8 967 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 PILRBQ9UKJ0 227 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 CYP8B1Q9UNU6 501 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 COL5A1P20908 1838 aaPredicted RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 WASH4PA8MWX3 477 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 H0Y626 953 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 TM4SF5O14894 197 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 SPINT1O43278 529 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ALDH1A2O94788 518 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 IGHV4-34P06331 123 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ZNF806P0C7X5 589 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 POLR2EP19388 210 aaKnown RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 TNFAIP3P21580 790 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ITPKAP23677 461 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 L1CAMP32004 1257 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ACSL1P33121 698 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ACVRL1P37023 503 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 BNC1Q01954 994 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 USP39Q53GS9 565 aaKnown RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 SPDYCQ5MJ68 293 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 RNF219Q5W0B1 726 aaPredicted RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 AFMIDQ63HM1 303 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 NUDT18Q6ZVK8 323 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 CEP68Q76N32 757 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ARHGAP12Q8IWW6 846 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 TMEFF1Q8IYR6 380 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 NPWQ8N729 165 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 NIPA2Q8N8Q9 360 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 TC2NQ8N9U0 490 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 UCMAQ8WVF2 138 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 TSC1Q92574 1164 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ZNF419Q96HQ0 510 aaPredicted RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 BTBD6Q96KE9 485 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 CHP1Q99653 195 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 ZYG11BQ9C0D3 744 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 LRRC19Q9H756 370 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 PRDM16Q9HAZ2 1276 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 PDFQ9HBH1 243 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 CAPN10Q9HC96 672 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 TMEM51Q9NW97 253 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 NCDNQ9UBB6 729 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 CNOT8Q9UFF9 292 aaKnown RBP8.9□□□□□ -0.98
SMG6-216ENST00000575176 OR12D3Q9UGF7 316 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 MFHAS1Q9Y4C4 1052 aa8.9□□□□□ -0.98
SMG6-216ENST00000575176 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 SSU72P8A0A1W2PR75 194 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 ILVBLA1L0T0 632 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TYW5A2RUC4 315 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 ATP5BP06576 529 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 RHOCP08134 193 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 RHOQP17081 205 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 MIPP30301 263 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 EIF4A3P38919 411 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 MAPKAPK2P49137 400 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 SERPINH1P50454 418 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms