RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	RNF225	M0QZC1	329 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	RTN2	O75298	545 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	BRD2	P25440	801 aa	Known RBP	11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	MAT2A	P31153	395 aa	Known RBP	11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	RPL34	P49207	117 aa	Known RBP	11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	RHD	Q02161	417 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	SULT2A1	Q06520	285 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	LRMP	Q12912	555 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC12A1	Q13621	1099 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	STAT4	Q14765	748 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	STIL	Q15468	1287 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	CDCP2	Q5VXM1	449 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	TMEM270	Q6UE05	265 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	KRBA2	Q6ZNG9	492 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	BEND5	Q7L4P6	421 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	OR4C6	Q8NH72	309 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	KLHDC7B	Q96G42	594 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	ZNF578	Q96N58	590 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	SPAG5	Q96R06	1193 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	LGMN	Q99538	433 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	MIS12	Q9H081	205 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	SARDH	Q9UL12	918 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	PCDHB1	Q9Y5F3	818 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	MAST4	O15021	2626 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC16A3	O15427	465 aa	Known RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	DXO	O77932	396 aa	Known RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	MOCS2	O96007	188 aa	Predicted RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	TACR2	P21452	398 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	DGKA	P23743	735 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	PCBP4	P57723	403 aa	Known RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	DAB2	P98082	770 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	CNTN1	Q12860	1018 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	SETMAR	Q53H47	684 aa	Predicted RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	TAF1B	Q53T94	588 aa	Predicted RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	AGBL4	Q5VU57	503 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	FAM46C	Q5VWP2	391 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	SYPL2	Q5VXT5	272 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	RAP1GAP2	Q684P5	730 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	DSG4	Q86SJ6	1040 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	TAC4	Q86UU9	113 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	CHSY1	Q86X52	802 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	LSMEM2	Q8N112	164 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	TMEM145	Q8NBT3	493 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	AHCTF1	Q8WYP5	2266 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	OR8D1	Q8WZ84	308 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC35C1	Q96A29	364 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	SPATA32	Q96LK8	384 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	KLHL11	Q9NVR0	708 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	PPM1H	Q9ULR3	514 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	CA5B	Q9Y2D0	317 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	PCDHB4	Q9Y5E5	795 aa		11.73	□□□□□ -0.53
TCF4-238	ENST00000568169	ALOX15B	O15296	676 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	SART1	O43290	800 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	ATP9B	O43861	1147 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	OPA1	O60313	960 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	RNGTT	O60942	597 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	IGLV3-25	P01717	112 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	APOE	P02649	317 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	MPO	P05164	745 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	GIMD1	P0DJR0	217 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	CKMT1A	P12532	417 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	PDGFRA	P16234	1089 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	PRCP	P42785	496 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	LSS	P48449	732 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	UCN	P55089	124 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	TMPRSS3	P57727	454 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	TAS2R38	P59533	333 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	FKBP3	Q00688	224 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	BROX	Q5VW32	411 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	CXorf57	Q6NSI4	855 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	CCAR2	Q8N163	923 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	SNRNP27	Q8WVK2	155 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	ERCC4	Q92889	916 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	KAT5	Q92993	513 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	FAM149B1	Q96BN6	582 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	ALG14	Q96F25	216 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	NAF1	Q96HR8	494 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	BTN2A3P	Q96KV6	586 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	NT5C1B	Q96P26	610 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	PRMT1	Q99873	361 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	UCKL1	Q9NWZ5	548 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	TJP2	Q9UDY2	1190 aa		11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF4-238	ENST00000568169	UNC13C	Q8NB66	2214 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169		A0A1B0GVM2	712 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	TCAF2	A6NFQ2	919 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169		F5H5T6	163 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	MCF2L	O15068	1137 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	PMM2	O15305	246 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	PIAS2	O75928	621 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	ZNF202	O95125	648 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	TRUB2	O95900	331 aa	Known RBP	11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	CALCA	P01258	141 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	THEGL	P0DJG4	465 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	GPD2	P43304	727 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	FMO5	P49326	533 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms