RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SLC30A9Q6PML9 568 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 RGS9BPQ6ZS82 235 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 PRPF39Q86UA1 669 aaKnown RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 GDAP1Q8TB36 358 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 C2orf15Q8WU43 125 aaKnown RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 C1orf74Q96LT6 269 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 TSGA13Q96PP4 275 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 MICAL3Q7RTP6 2002 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 FAM159BA6NKW6 160 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 TM9SF1O15321 606 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 LMNAP02545 664 aaKnown RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 GALTP07902 379 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 GATMP50440 423 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 TEX44Q53QW1 395 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 TTC39BQ5VTQ0 682 aaPredicted RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 C1orf53Q5VUE5 145 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 DPF3Q92784 378 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 INPP5DQ92835 1189 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 SPATA17Q96L03 361 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 GBA3Q9H227 469 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 MLXIPLQ9NP71 852 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 CLIC5Q9NZA1 410 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 MOCS1Q9NZB8 636 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 FNIP2Q9P278 1114 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 HNRNPCL1O60812 293 aaKnown RBP23.79■■□□□ 1.4
LINC00543-201ENST00000567234 ALDH1A2O94788 518 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 UNC5CO95185 931 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 MT-ND3P03897 115 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 RPA3P35244 121 aaPredicted RBP23.79■■□□□ 1.4
LINC00543-201ENST00000567234 TAF11Q15544 211 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 NUGGCQ68CJ6 796 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 ANKS3Q6ZW76 656 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 MPP5Q8N3R9 675 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 ENDOVQ8N8Q3 282 aaKnown RBP23.79■■□□□ 1.4
LINC00543-201ENST00000567234 BANPQ8N9N5 519 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 SLC39A13Q96H72 371 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 FCRL2Q96LA5 508 aaPredicted RBP23.79■■□□□ 1.4
LINC00543-201ENST00000567234 TOX2Q96NM4 488 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 TGS1Q96RS0 853 aaKnown RBP23.79■■□□□ 1.4
LINC00543-201ENST00000567234 SIK2Q9H0K1 926 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 LRMDAQ9H2I8 198 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 OSER1Q9NX31 292 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 KLHL14Q9P2G3 628 aa23.79■■□□□ 1.4
LINC00543-201ENST00000567234 KRT37O76014 449 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 AP2A1O95782 977 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 KRT16P08779 473 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 CCNCP24863 283 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 WASHC2DQ5SRD0 308 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 RWDD4Q6NW29 188 aaKnown RBP23.78■■□□□ 1.4
LINC00543-201ENST00000567234 PPM1NQ8N819 430 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 ATAD1Q8NBU5 361 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 CEP41Q9BYV8 373 aa23.78■■□□□ 1.4
LINC00543-201ENST00000567234 OLA1Q9NTK5 396 aaKnown RBP23.78■■□□□ 1.4
LINC00543-201ENST00000567234 TBKBP1A7MCY6 615 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 MSI1O43347 362 aaKnown RBP23.77■■□□□ 1.4
LINC00543-201ENST00000567234 PIAS1O75925 651 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 SNRPAP09012 282 aaKnown RBP23.77■■□□□ 1.4
LINC00543-201ENST00000567234 SRGAP2BP0DMP2 458 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 CPB1P15086 417 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 GNAZP19086 355 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 EN2P19622 333 aaPredicted RBP23.77■■□□□ 1.4
LINC00543-201ENST00000567234 YWHAQP27348 245 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 GPR15P49685 360 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 SLC18A2Q05940 514 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 LRRC49Q8IUZ0 686 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 CTAGE3PQ8IX95 158 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 LRRC43Q8N309 656 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 TTC17Q96AE7 1141 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 MTBPQ96DY7 904 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 TEKT5Q96M29 485 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 PGLYRP2Q96PD5 576 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 RNPEPL1Q9HAU8 725 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 TBX21Q9UL17 535 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 MTMR11A4FU01 709 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 WASH4PA8MWX3 477 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 ACADSP16219 412 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 PGAM1P18669 254 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 TAC1P20366 129 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 CALB2P22676 271 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 SERPINB9P50453 376 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 MLLT6P55198 1093 aaPredicted RBP23.77■■□□□ 1.4
LINC00543-201ENST00000567234 ARTNQ5T4W7 220 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 SDHAF4Q5VUM1 108 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 KCTD11Q693B1 232 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 ZNF449Q6P9G9 518 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 ZSCAN18Q8TBC5 510 aaPredicted RBP23.77■■□□□ 1.4
LINC00543-201ENST00000567234 ARNTL2Q8WYA1 636 aa23.77■■□□□ 1.4
LINC00543-201ENST00000567234 DOCK4Q8N1I0 1966 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 CXorf49A8MYA2 514 aaPredicted RBP23.76■■□□□ 1.39
LINC00543-201ENST00000567234 ZBTB24O43167 697 aaPredicted RBP23.76■■□□□ 1.39
LINC00543-201ENST00000567234 PSMD3O43242 534 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 ATP6V1C1P21283 382 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 USP46P62068 366 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 NAB1Q13506 487 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 PDK4Q16654 411 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 SH2D5Q6ZV89 423 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 NECAB2Q7Z6G3 386 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 KLHDC8BQ8IXV7 354 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 CEP295NLQ96MC4 621 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms