RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 RPL10LQ96L21 214 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 CEP63Q96MT8 703 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 MED15Q96RN5 788 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 ZSWIM1Q9BR11 485 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 POPDC2Q9HBU9 364 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 NAALADL1Q9UQQ1 740 aa16.24■□□□□ 0.19
HERPUD1-205ENST00000562914 KCNU1A8MYU2 1149 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 RNF225M0QZC1 329 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 SMC2O95347 1197 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 PPP2CBP62714 309 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 PPP2CAP67775 309 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 STIM1Q13586 685 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 RAP1GAP2Q684P5 730 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 NEK5Q6P3R8 708 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 LSMEM2Q8N112 164 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 CCAR2Q8N163 923 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 FRS2Q8WU20 508 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 PREBQ9HCU5 417 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 SLC25A13Q9UJS0 675 aa16.23■□□□□ 0.19
HERPUD1-205ENST00000562914 ASXL3Q9C0F0 2248 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 PSMA7O14818 248 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 MED7O43513 233 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 ATP9BO43861 1147 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 BRINP1O60477 761 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 TRUB2O95900 331 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 IGLV3-25P01717 112 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 STK19P49842 368 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 UCNP55089 124 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 CLDN6P56747 220 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 YWHAZP63104 245 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 INSM1Q01101 510 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 PNOCQ13519 176 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 ZNF248Q8NDW4 579 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 FAM174AQ8TBP5 190 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 KLHDC7BQ96G42 594 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 ZNF578Q96N58 590 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 THAP9Q9H5L6 903 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 EVA1BQ9NVM1 165 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 HOOK1Q9UJC3 728 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 PPM1HQ9ULR3 514 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 NYNRINQ9P2P1 1898 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-205ENST00000562914 SHROOM3Q8TF72 1996 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 ERVH48-1M5A8F1 160 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 RIOK3O14730 519 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 MCF2LO15068 1137 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 RTN2O75298 545 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 C1QL1O75973 258 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 PRB1P04280 392 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 PDGFRAP16234 1089 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 CCR1P32246 355 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 TLE3Q04726 772 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 EIF4EBP2Q13542 120 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 AGBL4Q5VU57 503 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 FOXR2Q6PJQ5 311 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 ZNF605Q86T29 641 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 TMEM110Q86TL2 294 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 OR4C6Q8NH72 309 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 LMO3Q8TAP4 145 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 SPATA20Q8TB22 786 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 WBP1Q96G27 269 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 CCDC114Q96M63 670 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 PRMT1Q99873 361 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 SLC4A5Q9BY07 1137 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 USP29Q9HBJ7 922 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 XPO7Q9UIA9 1087 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 FARP1Q9Y4F1 1045 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 RAI2Q9Y5P3 530 aa16.21■□□□□ 0.19
HERPUD1-205ENST00000562914 HELZ2Q9BYK8 2649 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 SIGLEC6O43699 453 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 MT-CO3P00414 261 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 GP1BAP07359 652 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 GLI1P08151 1106 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 ALPPL2P10696 532 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 ZNF18P17022 549 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 MAT2AP31153 395 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 PCBP4P57723 403 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 DAB2P98082 770 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 ACCSLQ4AC99 568 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 CCDC40Q4G0X9 1142 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 BROXQ5VW32 411 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 ERICH1Q86X53 443 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 TMEM145Q8NBT3 493 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 SMARCE1Q969G3 411 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 RNF34Q969K3 372 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 IFT43Q96FT9 208 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 LGMNQ99538 433 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 KLHL11Q9NVR0 708 aa16.2■□□□□ 0.18
HERPUD1-205ENST00000562914 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
HERPUD1-205ENST00000562914 DXOO77932 396 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-205ENST00000562914 VAV1P15498 845 aa16.19■□□□□ 0.18
HERPUD1-205ENST00000562914 CDK17Q00537 523 aa16.19■□□□□ 0.18
HERPUD1-205ENST00000562914 RHDQ02161 417 aa16.19■□□□□ 0.18
HERPUD1-205ENST00000562914 CNTN1Q12860 1018 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms