RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 RASSF3Q86WH2 238 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 CDR2LQ86X02 465 aaPredicted RBP7.66□□□□□ -1.18
CFDP1-202ENST00000562602 CCDC117Q8IWD4 279 aaPredicted RBP7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ULK2Q8IYT8 1036 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ADGRF2Q8IZF7 708 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 SIX6OS1Q8N1H7 587 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 TMEM86AQ8N2M4 240 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 C12orf29Q8N999 325 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.66□□□□□ -1.18
CFDP1-202ENST00000562602 RBM15BQ8NDT2 890 aaKnown RBP7.66□□□□□ -1.18
CFDP1-202ENST00000562602 CATSPER1Q8NEC5 780 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 RNF139Q8WU17 664 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 COPS5Q92905 334 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 WNT8BQ93098 351 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 PPP2R3CQ969Q6 453 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 FAM136AQ96C01 138 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 PGAP3Q96FM1 320 aaPredicted RBP7.66□□□□□ -1.18
CFDP1-202ENST00000562602 CERS2Q96G23 380 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 P2RY11Q96G91 374 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 CLMNQ96JQ2 1002 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 SLC2A13Q96QE2 648 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 KCNK16Q96T55 309 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 C16orf70Q9BSU1 422 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 IL22Q9GZX6 179 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ADAMTS10Q9H324 1103 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ABHD16BQ9H3Z7 469 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 LRRC4Q9HBW1 653 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ARHGEF4Q9NR80 690 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 SMYD2Q9NRG4 433 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 SLC38A7Q9NVC3 462 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 GPATCH2LQ9NWQ4 482 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ZDHHC7Q9NXF8 308 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 NDUFA13Q9P0J0 144 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 COPG2Q9UBF2 871 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 ARHGAP26Q9UNA1 814 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 PLA2G4CQ9UP65 541 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 DNAJC16Q9Y2G8 782 aa7.66□□□□□ -1.18
CFDP1-202ENST00000562602 EEF2KO00418 725 aaKnown RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PEX1O43933 1283 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 TBX10O75333 385 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 KRT36O76013 467 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PROCP04070 461 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 FESP07332 822 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 C6orf222P0C671 652 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 THRAP10827 490 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 FGF3P11487 239 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 GNAT1P11488 350 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 LCP1P13796 627 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 DARSP14868 501 aaKnown RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 ANPEPP15144 967 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 NPR3P17342 541 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 AMPD1P23109 780 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 LRPAP1P30533 357 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 HOXA11P31270 313 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PSMC4P43686 418 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 LHX1P48742 406 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 LIMK2P53671 638 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 ALDH18A1P54886 795 aaKnown RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 SLC10A2Q12908 348 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 GRIK3Q13003 919 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 BMPR2Q13873 1038 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PDE1CQ14123 709 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 SH2D4BQ5SQS7 431 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 TEDDM1Q5T9Z0 273 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 NAPEPLDQ6IQ20 393 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 ZFP1Q6P2D0 407 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 TMEM154Q6P9G4 183 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 RFWD3Q6PCD5 774 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 C16orf89Q6UX73 402 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 DENND5BQ6ZUT9 1274 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 RFX8Q6ZV50 586 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 USP50Q70EL3 339 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 BEND5Q7L4P6 421 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 SDCCAG8Q86SQ7 713 aaPredicted RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 LRRC49Q8IUZ0 686 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 ACTRT2Q8TDY3 377 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 IRGQQ8WZA9 623 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 WDR90Q96KV7 1748 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 NPY6RQ99463 290 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 RBBP8Q99708 897 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 RTKNQ9BST9 563 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 THTPAQ9BU02 230 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 Q9H521 79 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PLAC1Q9HBJ0 212 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 MRM3Q9HC36 420 aaKnown RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 TXNRD2Q9NNW7 524 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 CNGB3Q9NQW8 809 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PDGFCQ9NRA1 345 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 FAM49BQ9NUQ9 324 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 SNTG2Q9NY99 539 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 TLK1Q9UKI8 766 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PRPF19Q9UMS4 504 aaKnown RBP7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PCDHB12Q9Y5F1 795 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 PTCH2Q9Y6C5 1203 aa7.65□□□□□ -1.18
CFDP1-202ENST00000562602 LRRC37A2A6NM11 1700 aa7.64□□□□□ -1.19
CFDP1-202ENST00000562602 SMIM28A0A1B0GU29 152 aa7.64□□□□□ -1.19
CFDP1-202ENST00000562602 ARHGEF37A1IGU5 675 aa7.64□□□□□ -1.19
CFDP1-202ENST00000562602 HMX2A2RU54 273 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms