RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HSF2BPO75031 334 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 FGFR1OPO95684 399 aaKnown RBP17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ERBB2P04626 1255 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TBC1D3HP0C7X1 549 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SLC2A3P11169 496 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 GGCXP38435 758 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 NNMTP40261 264 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 NXPH1P58417 271 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SULT2A1Q06520 285 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CYP4F3Q08477 520 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 AUHQ13825 339 aaKnown RBP17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TBC1D3GQ6DHY5 549 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TBC1D3CQ6IPX1 549 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 OLFML1Q6UWY5 402 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TBC1D3Q8IZP1 549 aaPredicted RBP17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 C1orf131Q8NDD1 294 aaKnown RBP17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 VANGL2Q9ULK5 521 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 HS3ST4Q9Y661 456 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CABIN1Q9Y6J0 2220 aa17.19■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TLR4O00206 839 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ATP9BO43861 1147 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 RTN2O75298 545 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ITGAVP06756 1048 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PON1P27169 355 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 EPHA8P29322 1005 aaPredicted RBP17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 VASPP50552 380 aaPredicted RBP17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 DNAJC3Q13217 504 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 NME3Q13232 169 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 EFHC1Q5JVL4 640 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 OTUD1Q5VV17 481 aaPredicted RBP17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 GBP6Q6ZN66 633 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PDZD3Q86UT5 571 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 IRF2BP1Q8IU81 584 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CREBRFQ8IUR6 639 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 RNF34Q969K3 372 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 FAM81BQ96LP2 452 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 FEM1AQ9BSK4 669 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 OR51B4Q9Y5P0 310 aa17.18■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 IGSF10Q6WRI0 2623 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ENC1O14682 589 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PLRG1O43660 514 aaKnown RBP17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 DAB1O75553 588 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 OXCT1P55809 520 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CLDN6P56747 220 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 EXOC3L4Q17RC7 722 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ACCSLQ4AC99 568 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 AGBL4Q5VU57 503 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 NAPEPLDQ6IQ20 393 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 C11orf57Q6ZUT1 292 aaPredicted RBP17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 Q6ZVU0 165 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 C14orf80Q86SX3 495 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SPATS2Q86XZ4 545 aaKnown RBP17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 EID2Q8N6I1 236 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 HNRNPLLQ8WVV9 542 aaKnown RBP17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 OR8D1Q8WZ84 308 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CNDP2Q96KP4 475 aaKnown RBP17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 KDM4CQ9H3R0 1056 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SIX2Q9NPC8 291 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ANLNQ9NQW6 1124 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 BAHCC1Q9P281 2608 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SLC25A13Q9UJS0 675 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PPM1HQ9ULR3 514 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TPX2Q9ULW0 747 aaKnown RBP17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PCDHGA1Q9Y5H4 931 aa17.17■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 GTPBP10A4D1E9 387 aaKnown RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 I6L893 689 aaPredicted RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 M0QYT0 321 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 YKT6O15498 198 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SLC7A4O43246 635 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PAGE1O75459 146 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 LDOC1O95751 146 aaPredicted RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PNMA6AP0CW24 399 aaPredicted RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 MAT2AP31153 395 aaKnown RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CLCN1P35523 988 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ARRB1P49407 418 aaPredicted RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CNTN1Q12860 1018 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 BNIP3Q12983 259 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 DLG2Q15700 870 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 CAMK4Q16566 473 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 POM121L1PQ3SYA9 428 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 C5orf22Q49AR2 442 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PTPN20Q4JDL3 420 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SLC45A4Q5BKX6 768 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 OR6B2Q6IFH4 312 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 DSG4Q86SJ6 1040 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SLC47A2Q86VL8 602 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 TMPRSS12Q86WS5 348 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SH2D3CQ8N5H7 860 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 MFSD2AQ8NA29 543 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 ERVMER34-1Q9H9K5 563 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 SCUBE2Q9NQ36 999 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PLCB1Q9NQ66 1216 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 PIGVQ9NUD9 493 aa17.16■□□□□ 0.34
VPS9D1-AS1-201ENST00000562298 KIAA1468Q9P260 1216 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms