RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 BANF1O75531 89 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 STK10O94804 968 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TBX18O95935 607 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 C1QAP02745 245 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA6DP0CG33 693 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 LAG3P18627 525 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TPSB2P20231 275 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 CCR1P32246 355 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 OR1D2P34982 312 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 MLLT6P55198 1093 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ARPP19P56211 112 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TPI1P60174 286 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 RPL10AP62906 217 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 PPIDQ08752 370 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 IFRD2Q12894 506 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 SEMA5AQ13591 1074 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 AUHQ13825 339 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 RAB33AQ14088 237 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 PDK1Q15118 436 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TRIP4Q15650 581 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TPSAB1Q15661 275 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TPGS2Q68CL5 300 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 PSRC1Q6PGN9 363 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 C4orf22Q6V702 233 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 KDM7AQ6ZMT4 941 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 CEP128Q6ZU80 1094 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 BZW1Q7L1Q6 419 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 CAND1Q86VP6 1230 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 NLRP14Q86W24 1093 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 CCDC25Q86WR0 208 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 CCDC13Q8IYE1 715 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 MCUQ8NE86 351 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF461Q8TAF7 563 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TFB1MQ8WVM0 346 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 HTR3CQ8WXA8 447 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 FBXO32Q969P5 355 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 EXOC4Q96A65 974 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 PGM2Q96G03 612 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 P2RY11Q96G91 374 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 C9orf72Q96LT7 481 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 MYRFLQ96LU7 910 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 SPATA13Q96N96 652 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 SERPINB11Q96P15 392 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 TSGA13Q96PP4 275 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 PRMT1Q99873 361 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 IER2Q9BTL4 223 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ROPN1BQ9BZX4 212 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 MTIF3Q9H2K0 278 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 NOL6Q9H6R4 1146 aaKnown RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ROPN1Q9HAT0 212 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ETNK1Q9HBU6 452 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 RXFP1Q9HBX9 757 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 SAYSD1Q9NPB0 183 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA6AQ9NYA3 693 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 SPG21Q9NZD8 308 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 HS3ST4Q9Y661 456 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 ANAPC1Q9H1A4 1944 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF840PA6NDX5 716 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 DRGXA6NNA5 263 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 RNF103O00237 685 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 CACNG3O60359 315 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 OPHN1O60890 802 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 SHOX2O60902 331 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 GJB5O95377 273 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ACSL3O95573 720 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 FGBP02675 491 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 MYZAPP0CAP1 466 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TSHRP16473 764 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 CD53P19397 219 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 PTPN3P26045 913 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 CD68P34810 354 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TUFMP49411 452 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 IRAK1P51617 712 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ARL4CP56559 192 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 IFI35P80217 286 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 RING1Q06587 406 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF33AQ06730 810 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 BTG3Q14201 252 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 RASA2Q15283 850 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 SHHQ15465 462 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 HIF1AQ16665 826 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 KRT71Q3SY84 523 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 MGAT5BQ3V5L5 792 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 C5orf22Q49AR2 442 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ANKRD20A2Q5SQ80 823 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TMEM240Q5SV17 173 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 FAXCQ5TGI0 409 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ANKRD20A1Q5TYW2 823 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ANKRD20A3Q5VUR7 823 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 KCTD16Q68DU8 428 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 CENPUQ71F23 418 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TMEM150AQ86TG1 271 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TDRPQ86YL5 185 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TDHQ8IZJ6 230 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF567Q8N184 647 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TAB3Q8N5C8 712 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 UHMK1Q8TAS1 419 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms