RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 FAM107BQ9H098 131 aa11.13□□□□□ -0.63
SNRPA1-211ENST00000560433 UGT1A7Q9HAW7 530 aa11.13□□□□□ -0.63
SNRPA1-211ENST00000560433 UGT1A10Q9HAW8 530 aa11.13□□□□□ -0.63
SNRPA1-211ENST00000560433 UGT1A8Q9HAW9 530 aa11.13□□□□□ -0.63
SNRPA1-211ENST00000560433 KCNK9Q9NPC2 374 aa11.13□□□□□ -0.63
SNRPA1-211ENST00000560433 ENTPD7Q9NQZ7 604 aa11.13□□□□□ -0.63
SNRPA1-211ENST00000560433 A0A0D9SEW6 157 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 FGF10O15520 208 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 SPAG7O75391 227 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 CPP00450 1065 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 IGLV3-27P01718 113 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 CTSAP10619 480 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 CHN1P15882 459 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 TACR2P21452 398 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 OR1E1P30953 314 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 CORO1AP31146 461 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 FDFT1P37268 417 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 VEPH1Q14D04 833 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 FAM133BQ5BKY9 247 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 UNC5AQ6ZN44 842 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 MICALCLQ6ZW33 695 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 C4orf33Q8N1A6 199 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 ANKRD42Q8N9B4 389 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 DPF3Q92784 378 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 OXNAD1Q96HP4 312 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 PAFAH2Q99487 392 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 PRMT1Q99873 361 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 SMG9Q9H0W8 520 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 CERS4Q9HA82 394 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 SMYD2Q9NRG4 433 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 IPO11Q9UI26 975 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 ZFP37Q9Y6Q3 630 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 ANAPC1Q9H1A4 1944 aa11.12□□□□□ -0.63
SNRPA1-211ENST00000560433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 RASA4BC9J798 803 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 GOLGA8RI6L899 631 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 RASA4O43374 803 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 ATP9BO43861 1147 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 CDH16O75309 829 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 RFPL2O75678 378 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 STC2O76061 302 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 AGTP01019 485 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 HLA-DQB2P05538 268 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 ABHD2P08910 425 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 KRT15P19012 456 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 TPSB2P20231 275 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 IRS1P35568 1242 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PPM1AP35813 382 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MDH1P40925 334 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 EPHB3P54753 998 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 TPSAB1Q15661 275 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 TNFAIP8L3Q5GJ75 292 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 COL13A1Q5TAT6 717 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PPP1R21Q6ZMI0 780 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 FAM43BQ6ZT52 329 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 CEP128Q6ZU80 1094 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MAB21L3Q8N8X9 362 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 DNAAF3Q8N9W5 541 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 POF1BQ8WVV4 589 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 TEKT5Q96M29 485 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PRDM16Q9HAZ2 1276 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 RBM22Q9NW64 420 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 HCFC1R1Q9NWW0 138 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 SYBUQ9NX95 663 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 TRANK1O15050 2925 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MYO9BQ13459 2157 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 NDC80O14777 642 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PER2O15055 1255 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 CCL16O15467 120 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 GABRR2P28476 465 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PHBP35232 272 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MAGEA3P43357 314 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MAGEA6P43360 314 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 IFNAR2P48551 515 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 HARS2P49590 506 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 SKOR1P84550 965 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 ITKQ08881 620 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 SLC10A7Q0GE19 358 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MPP2Q14168 576 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 CERCAMQ5T4B2 595 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 TCEAL8Q8IYN2 117 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PPM1NQ8N819 430 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 MCUQ8NE86 351 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 RAD9AQ99638 391 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 C12orf65Q9H3J6 166 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 EURLQ9NYK6 297 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 IGSF9Q9P2J2 1179 aa11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 PRRC2BQ5JSZ5 2229 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-211ENST00000560433 A0A1W2PRU2 124 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 F5H5T6 163 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 SMAPO00193 183 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 EIF3HO15372 352 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 ACSL4O60488 711 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 C8AP07357 584 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 IVLP07476 585 aa11.1□□□□□ -0.63
SNRPA1-211ENST00000560433 BRAFP15056 766 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms