RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CDK5RAP1Q96SZ6 601 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 IMPG2Q9BZV3 1241 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 DCLK3Q9C098 648 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 CIPCQ9C0C6 399 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 GAREM1Q9H706 876 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 EBF2Q9HAK2 575 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 PRSS16Q9NQE7 514 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 ZDHHC3Q9NYG2 299 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 KIAA1522Q9P206 1035 aaPredicted RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 SUSD2Q9UGT4 822 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 TSPAN16Q9UKR8 245 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 INTS6Q9UL03 887 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 CACNA1GO43497 2377 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 TRIM49BA6NDI0 452 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MEI4A8MW99 385 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 KCNK3O14649 394 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 TIMM44O43615 452 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 SYNCRIPO60506 623 aaKnown RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 IGHV4-34P06331 123 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 GNSP15586 552 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 RPL13P26373 211 aaKnown RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 OXTRP30559 389 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 CD70P32970 193 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 BCAT1P54687 386 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 DAOAP59103 153 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ZNF445P59923 1031 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ADIGQ0VDE8 80 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 BST2Q10589 180 aaKnown RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 PNOCQ13519 176 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 CUL2Q13617 745 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 KIF19Q2TAC6 998 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MPPE1Q53F39 396 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 COBLL1Q53SF7 1204 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 FSCBQ5H9T9 825 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ADGRF1Q5T601 910 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 PIK3R6Q5UE93 754 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MBLAC2Q68D91 279 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ANKRD40Q6AI12 368 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 PMF1Q6P1K2 205 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MSANTD2Q6P1R3 559 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 RFWD3Q6PCD5 774 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 LCLAT1Q6UWP7 414 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 SERPINA13PQ6UXR4 307 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 CHST9Q7L1S5 443 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 RSRC2Q7L4I2 434 aaKnown RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 TMPRSS7Q7RTY8 843 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ARHGAP18Q8N392 663 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ENGASEQ8NFI3 743 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 SPATA20Q8TB22 786 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MDM1Q8TC05 714 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 SLC35F5Q8WV83 523 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 UCMAQ8WVF2 138 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ANP32BQ92688 251 aaKnown RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 ERCC4Q92889 916 aaPredicted RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 KAT5Q92993 513 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 BIRC7Q96CA5 298 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MRGPRX3Q96LB0 322 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 PRICKLE1Q96MT3 831 aaPredicted RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 NUP58Q9BVL2 599 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ZDHHC5Q9C0B5 715 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 MIR1-1HGQ9H1L0 117 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 GDPD2Q9HCC8 539 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 TM9SF3Q9HD45 589 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 OSGEPQ9NPF4 335 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 TM7SF3Q9NS93 570 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 ABCB8Q9NUT2 735 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 SERGEFQ9UGK8 458 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 GGA2Q9UJY4 613 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 STRIP2Q9ULQ0 834 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 HBS1LQ9Y450 684 aaKnown RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 PCDHGB2Q9Y5G2 931 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 SNX11Q9Y5W9 270 aa6.03□□□□□ -1.44
USP3-215ENST00000559771 COL5A1P20908 1838 aaPredicted RBP6.03□□□□□ -1.44
USP3-215ENST00000559771 ATRXP46100 2492 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 H0Y8X5 98 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 WNT9AO14904 365 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 DEAF1O75398 565 aaPredicted RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 CER1O95813 267 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 LATS1O95835 1130 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 WNT1P04628 370 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 CYBBP04839 570 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 DLDP09622 509 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 VDRP11473 427 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 PABPC1P11940 636 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 BMP6P22004 513 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 BUD31P41223 144 aaPredicted RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 MATKP42679 507 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 CTSKP43235 329 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 RPL34P49207 117 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 RGS7P49802 495 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 AFF3P51826 1226 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 RPS24P62847 133 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 KRT85P78386 507 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 KCNJ12Q14500 433 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 SHBQ15464 509 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 SOWAHCQ53LP3 525 aaPredicted RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 SGO2Q562F6 1265 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 MPP7Q5T2T1 576 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 C19orf48Q6RUI8 117 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms