RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TNK2Q07912 1038 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 PPIDQ08752 370 aaKnown RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 CDKL3Q8IVW4 592 aaPredicted RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 CCDC117Q8IWD4 279 aaPredicted RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 ATPAF2Q8N5M1 289 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 CCNYQ8ND76 341 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 SLCO2A1Q92959 643 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 ARHGEF2Q92974 986 aaKnown RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 TSGA13Q96PP4 275 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 TRMT61BQ9BVS5 477 aaKnown RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 ECT2Q9H8V3 914 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 USP29Q9HBJ7 922 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 FEZ2Q9UHY8 353 aaPredicted RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 EFCAB8A8MWE9 144 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 MAFKO60675 156 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 RBL1P28749 1068 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 GDI1P31150 447 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 ACVRL1P37023 503 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 PTGIRP43119 386 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 TFF2Q03403 129 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 GAD2Q05329 585 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 ZNF33AQ06730 810 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 SERINC3Q13530 473 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 DHX34Q14147 1143 aaKnown RBP18.51■□□□□ 0.55
CLPX-203ENST00000558958 RNF219Q5W0B1 726 aaPredicted RBP18.51■□□□□ 0.55
CLPX-203ENST00000558958 ARHGAP36Q6ZRI8 547 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 ALLCQ8N6M5 410 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 OR7D4Q8NG98 312 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 CCDC26Q8TAB7 109 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 GRK7Q8WTQ7 553 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 RSAD2Q8WXG1 361 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 LMLNQ96KR4 655 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 CCDC114Q96M63 670 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 FAM50BQ9Y247 325 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 MYOFQ9NZM1 2061 aa18.51■□□□□ 0.55
CLPX-203ENST00000558958 CFAP69A5D8W1 941 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 OTOL1A6NHN0 477 aaPredicted RBP18.5■□□□□ 0.55
CLPX-203ENST00000558958 RAD51CO43502 376 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 CACNG3O60359 315 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 VAV1P15498 845 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 CCNCP24863 283 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 STIP1P31948 543 aaKnown RBP18.5■□□□□ 0.55
CLPX-203ENST00000558958 ETFBP38117 255 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 OXCT1P55809 520 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 DR1Q01658 176 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 AP1B1Q10567 949 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 RUNX3Q13761 415 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 MAATS1Q7Z4T9 603 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 ZNF557Q8N988 423 aaPredicted RBP18.5■□□□□ 0.55
CLPX-203ENST00000558958 NXPE3Q969Y0 559 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 FEM1AQ9BSK4 669 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 LRRC1Q9BTT6 524 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 ACE2Q9BYF1 805 aaPredicted RBP18.5■□□□□ 0.55
CLPX-203ENST00000558958 SLC2A11Q9BYW1 496 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 PRDM6Q9NQX0 595 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 KIAA1522Q9P206 1035 aaPredicted RBP18.5■□□□□ 0.55
CLPX-203ENST00000558958 LIMD1Q9UGP4 676 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 IPO11Q9UI26 975 aaKnown RBP18.5■□□□□ 0.55
CLPX-203ENST00000558958 FBXO10Q9UK96 956 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 OR51B4Q9Y5P0 310 aa18.5■□□□□ 0.55
CLPX-203ENST00000558958 CHD5Q8TDI0 1954 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 ARNTLO00327 626 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 ECEL1O95672 775 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 MZF1P28698 734 aaPredicted RBP18.49■□□□□ 0.55
CLPX-203ENST00000558958 CSKP41240 450 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 GDF10P55107 478 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 TUBB4BP68371 445 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 MRPS25P82663 173 aaKnown RBP18.49■□□□□ 0.55
CLPX-203ENST00000558958 LMAN2Q12907 356 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 NR1H3Q13133 447 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 GAB4Q2WGN9 574 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 HEATR6Q6AI08 1181 aaKnown RBP18.49■□□□□ 0.55
CLPX-203ENST00000558958 ASTLQ6HA08 431 aaPredicted RBP18.49■□□□□ 0.55
CLPX-203ENST00000558958 C8orf74Q6P047 294 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 CCDC13Q8IYE1 715 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 CPA6Q8N4T0 437 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 FAM71DQ8N9W8 422 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 HTR3CQ8WXA8 447 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 RTP4Q96DX8 246 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 ALG14Q96F25 216 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 MUC3BQ9H195 1237 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 KCNK12Q9HB15 430 aa18.49■□□□□ 0.55
CLPX-203ENST00000558958 SGK1O00141 431 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 KCNN4O15554 427 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 TTI1O43156 1089 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 ZNF189O75820 626 aaPredicted RBP18.48■□□□□ 0.55
CLPX-203ENST00000558958 GAS8O95995 478 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 IL9P15248 144 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 HLA-FP30511 346 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 CD70P32970 193 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 PLK1P53350 603 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 SLC12A1Q13621 1099 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 AAK1Q2M2I8 961 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 GLE1Q53GS7 698 aaKnown RBP18.48■□□□□ 0.55
CLPX-203ENST00000558958 TEX35Q5T0J7 233 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 IL31Q6EBC2 164 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 GSTA5Q7RTV2 222 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 JAMLQ86YT9 394 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 ETFBKMTQ8IXQ9 262 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms