RNA–Protein interactions for RNA: ENST00000557459.1

NFKBIA-210, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2

Gene NFKBIA, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-210ENST00000557459 C12orf40Q86WS4 652 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 RTL3Q8N8U3 475 aaKnown RBP16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 EXD1Q8NHP7 514 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 FAM3CQ92520 227 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 CHFRQ96EP1 664 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 CSPG4P5Q96PW8 444 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 ZNF670Q9BS34 389 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 PARD6AQ9NPB6 346 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 PRMT8Q9NR22 394 aaPredicted RBP16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 ARHGEF4Q9NR80 690 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 TMEM248Q9NWD8 314 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 CLEC4EQ9ULY5 219 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 NDRG2Q9UN36 371 aaKnown RBP16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 NEU3Q9UQ49 428 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 TBC1D30Q9Y2I9 924 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 SLC27A6Q9Y2P4 619 aa16.46■□□□□ 0.23
NFKBIA-210ENST00000557459 MIA3Q5JRA6 1907 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 APODP05090 189 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 CD48P09326 243 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 ERCC2P18074 760 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 IL4RP24394 825 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 CETN2P41208 172 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 GRIA2P42262 883 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 FZD5Q13467 585 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 SLC12A1Q13621 1099 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 RPS6KA1Q15418 735 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 C6orf118Q5T5N4 469 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 TXNDC11Q6PKC3 985 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 RNF25Q96BH1 459 aaPredicted RBP16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 RBM41Q96IZ5 413 aaKnown RBP16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 PRDM16Q9HAZ2 1276 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 ZNF212Q9UDV6 495 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 RAB23Q9ULC3 237 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 ZKSCAN5Q9Y2L8 839 aa16.45■□□□□ 0.22
NFKBIA-210ENST00000557459 A0A0A0MRY4 1105 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 TBC1D3BA6NDS4 549 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 C3orf70A6NLC5 250 aaPredicted RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 KAT7O95251 611 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 RHOCP08134 193 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 DRD1P21728 446 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 AMPD1P23109 780 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 COPS2P61201 443 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 KDSRQ06136 332 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 SPEM2Q0P670 501 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 DMC1Q14565 340 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 PON2Q15165 354 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 ANKRD20A8PQ5CZ79 823 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 TMEM196Q5HYL7 178 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 NAIF1Q69YI7 327 aaPredicted RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 CXorf57Q6NSI4 855 aaKnown RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 ZNF783Q6ZMS7 281 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 PHTF2Q8N3S3 785 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 WFDC5Q8TCV5 224 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 WFIKKN2Q8TEU8 576 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 FAF2Q96CS3 445 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 LMLNQ96KR4 655 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 MAK16Q9BXY0 300 aaKnown RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 FAM126AQ9BYI3 521 aaPredicted RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 FBRSL1Q9HCM7 1045 aaKnown RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 ABCB8Q9NUT2 735 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 PACSIN2Q9UNF0 486 aaPredicted RBP16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 JRKLQ9Y4A0 524 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 TICRRQ7Z2Z1 1910 aa16.44■□□□□ 0.22
NFKBIA-210ENST00000557459 SHISA7A6NL88 538 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 TRIM24O15164 1050 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 TIMM44O43615 452 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 PABPC1P11940 636 aaKnown RBP16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 HLA-FP30511 346 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 ETFBP38117 255 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 TNFRSF4P43489 277 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 PLK1P53350 603 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 LMAN2Q12907 356 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 TAZQ16635 292 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 ST3GAL2Q16842 350 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 RNF219Q5W0B1 726 aaPredicted RBP16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 TMCO3Q6UWJ1 677 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 MFSD7Q6UXD7 560 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 SPOCD1Q6ZMY3 1216 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 ANKS1BQ7Z6G8 1248 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 KIAA0907Q7Z7F0 614 aaPredicted RBP16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 CCDC50Q8IVM0 306 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 UMODL1-AS1Q8N2C9 162 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 SLC35F6Q8N357 371 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 LZTR1Q8N653 840 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 TERB1Q8NA31 727 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 PCDH19Q8TAB3 1148 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 ALG3Q92685 438 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 RNF157Q96PX1 679 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 FEM1AQ9BSK4 669 aa16.43■□□□□ 0.22
NFKBIA-210ENST00000557459 DNAI1Q9UI46 699 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms