RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 RTN3O95197 1032 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 METTL18O95568 372 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 GALTP07902 379 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SLC2A3P11169 496 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CCR1P32246 355 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SERPINB6P35237 376 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SLC11A1P49279 550 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 RABGGTBP53611 331 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 GAD2Q05329 585 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 PPIDQ08752 370 aaKnown RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FAAP100Q0VG06 881 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 GALNT2Q10471 571 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 WASHC5Q12768 1159 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 MTA1Q13330 715 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 BBS9Q3SYG4 887 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CTXN3Q4LDR2 81 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 ANKRD20A2Q5SQ80 823 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FAM72AQ5TYM5 149 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 ANKRD20A1Q5TYW2 823 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 MANEALQ5VSG8 457 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FAM171A1Q5VUB5 890 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 ANKRD20A3Q5VUR7 823 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 BTBD8Q5XKL5 378 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FAM72DQ6L9T8 149 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FUT10Q6P4F1 479 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 B4GALNT4Q76KP1 1039 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CAND1Q86VP6 1230 aaKnown RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 NLRP14Q86W24 1093 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FAM72BQ86X60 149 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SPATS2Q86XZ4 545 aaKnown RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CCNJLQ8IV13 435 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 KLHDC8BQ8IXV7 354 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 LZTR1Q8N653 840 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FBXO36Q8NEA4 188 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SPPL2BQ8TCT7 592 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 BCAS4Q8TDM0 211 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 HDAC11Q96DB2 347 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 P2RY11Q96G91 374 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 TSGA13Q96PP4 275 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CCT8L2Q96SF2 557 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CYTH2Q99418 400 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 TKTL2Q9H0I9 626 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 RNF208Q9H0X6 261 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 HIPK3Q9H422 1215 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 PRDM12Q9H4Q4 367 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 VPS37BQ9H9H4 285 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 MARCH5Q9NX47 278 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 IGSF9Q9P2J2 1179 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 HSFX1Q9UBD0 423 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 TRHDEQ9UKU6 1024 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 PRG3Q9Y2Y8 225 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 BACE2Q9Y5Z0 518 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 TSC2P49815 1807 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SYNJ2BP-COX16A0A087WUM0 186 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 ERI2A8K979 691 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 WASH4PA8MWX3 477 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 RNF103O00237 685 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 FGF10O15520 208 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 PRPF4O43172 522 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 LRIG2O94898 1065 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 AMHP03971 560 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 APRTP07741 180 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 HAPLN1P10915 354 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 VAV1P15498 845 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 CHN1P15882 459 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 IBSPP21815 317 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SSTR1P30872 391 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 STX2P32856 288 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 ELK3P41970 407 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 NRLP54845 237 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 MLLT6P55198 1093 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 HNRNPH2P55795 449 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 RPL10AP62906 217 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 COG7P83436 770 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 PCSK7Q16549 785 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 TCTN1Q2MV58 587 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 LRRC8BQ6P9F7 803 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF449Q6P9G9 518 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 C20orf204Q6ZNR8 217 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 TRABD2AQ86V40 505 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 IGDCC3Q8IVU1 814 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SCN4BQ8IWT1 228 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 RNF168Q8IYW5 571 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 LRRC43Q8N309 656 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 MDM1Q8TC05 714 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SCG3Q8WXD2 468 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 DPF3Q92784 378 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 FATE1Q969F0 183 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SLC39A13Q96H72 371 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms