RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 PDK1Q15118 436 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 PPM1LQ5SGD2 360 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 PATL1Q86TB9 770 aaKnown RBP16.33■□□□□ 0.2
MARK3-209ENST00000555235 HACE1Q8IYU2 909 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 RCN3Q96D15 328 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 ZNF597Q96LX8 424 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 QKIQ96PU8 341 aaKnown RBP eCLIP16.33■□□□□ 0.2
MARK3-209ENST00000555235 GPR20Q99678 358 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 SNRNP25Q9BV90 132 aaKnown RBP16.33■□□□□ 0.2
MARK3-209ENST00000555235 SLC4A5Q9BY07 1137 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 EFCAB1Q9HAE3 211 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 BARX2Q9UMQ3 279 aaPredicted RBP16.33■□□□□ 0.2
MARK3-209ENST00000555235 MYRFQ9Y2G1 1151 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 MATN2O00339 956 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 HDAC3O15379 428 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 CFLARO15519 480 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 IQCF3P0C7M6 154 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 P4HA1P13674 534 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 ENO3P13929 434 aaPredicted RBP16.33■□□□□ 0.2
MARK3-209ENST00000555235 CYP2F1P24903 491 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 NDST1P52848 882 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 PKNOX1P55347 436 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 RAB15P59190 212 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 Q6ZNX1 250 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 RSPH1Q8WYR4 309 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 OSBPL6Q9BZF3 934 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 NGRNQ9NPE2 291 aaKnown RBP16.33■□□□□ 0.2
MARK3-209ENST00000555235 EIF2B3Q9NR50 452 aaKnown RBP16.33■□□□□ 0.2
MARK3-209ENST00000555235 PNPLA3Q9NST1 481 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 MID2Q9UJV3 735 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 TSPAN16Q9UKR8 245 aa16.33■□□□□ 0.2
MARK3-209ENST00000555235 ACOT8O14734 319 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 ARIH2O95376 493 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 SLC10A2Q12908 348 aaPredicted RBP16.32■□□□□ 0.2
MARK3-209ENST00000555235 MGAT5BQ3V5L5 792 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 SLC44A4Q53GD3 710 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 OLFML1Q6UWY5 402 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 NAPRTQ6XQN6 538 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 PLPPR4Q7Z2D5 763 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 CARM1Q86X55 608 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 HM13Q8TCT9 377 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 TRAPPC12Q8WVT3 735 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 KHSRPQ92945 711 aaKnown RBP eCLIP16.32■□□□□ 0.2
MARK3-209ENST00000555235 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 KLHL32Q96NJ5 620 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 MTMR10Q9NXD2 777 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 KIAA1257Q9ULG3 409 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 RNF11Q9Y3C5 154 aa16.32■□□□□ 0.2
MARK3-209ENST00000555235 GOLGA8QA0A0J9YX86 632 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 GOLGA8OA6NCC3 632 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 GOLGA8NF8WBI6 632 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 G3V2L1 256 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 H3BNH8 94 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 CBFA2T3O75081 653 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 RNASEH2AO75792 299 aaKnown RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 FAM163BP0C2L3 166 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 ACADVLP49748 655 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 RGS7P49802 495 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 CRADDP78560 199 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 LSM12Q3MHD2 195 aaKnown RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 PPP6R3Q5H9R7 873 aaPredicted RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 KRT80Q6KB66 452 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 KCNT2Q6UVM3 1135 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 LBX2Q6XYB7 198 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 EEPD1Q7L9B9 569 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 USP13Q92995 863 aaPredicted RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 RMND5BQ96G75 393 aaPredicted RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 PHF12Q96QT6 1004 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 MRPL40Q9NQ50 206 aaKnown RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 VPS45Q9NRW7 570 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 ZNF358Q9NW07 568 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 RAP2CQ9Y3L5 183 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 MGAT1P26572 445 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 SDC4P31431 198 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 SPRP35270 261 aaPredicted RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 MSX2P35548 267 aaPredicted RBP16.31■□□□□ 0.2
MARK3-209ENST00000555235 GBE1Q04446 702 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 CNTD1Q8N815 330 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 ASB9Q96DX5 294 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 KLRG1Q96E93 195 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 ZNF385DQ9H6B1 395 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 IGSF9Q9P2J2 1179 aa16.31■□□□□ 0.2
MARK3-209ENST00000555235 A0A0A0MRY4 1105 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 TMEM221A6NGB7 291 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 ZNF701M0R085 212 aaPredicted RBP16.3■□□□□ 0.2
MARK3-209ENST00000555235 TRIM38O00635 465 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 MPOP05164 745 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 POLBP06746 335 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 MCF2P10911 925 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 RPL14P50914 215 aaKnown RBP16.3■□□□□ 0.2
MARK3-209ENST00000555235 CLCN3P51790 818 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 SESN2P58004 480 aaPredicted RBP16.3■□□□□ 0.2
MARK3-209ENST00000555235 NRF1Q16656 503 aa16.3■□□□□ 0.2
MARK3-209ENST00000555235 CMC1Q7Z7K0 106 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms