RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 COPG1Q9Y678 874 aaKnown RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 CYP3A7-CYP3A51PA0A087WV96 503 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 SLC22A23A1A5C7 686 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 C3orf70A6NLC5 250 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 C2CD4BA6NLJ0 364 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 PRSS47A8MTI9 375 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ADAM10O14672 748 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 SPTLC2O15270 562 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ANP32CO43423 234 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CNOT3O75175 753 aaKnown RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CNTN5O94779 1100 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 SGPL1O95470 568 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 FGBP02675 491 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ALDOAP04075 364 aaKnown RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ST6GAL1P15907 406 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CD72P21854 359 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CYP3A7P24462 503 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 AVPR2P30518 371 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 KRT9P35527 623 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 DDIT3P35638 169 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 PGM1P36871 562 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CASP6P55212 293 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 RPS13P62277 151 aaKnown RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CDK18Q07002 472 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 NFIL3Q16649 462 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 GLE1Q53GS7 698 aaKnown RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CBWD5Q5RIA9 395 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 C10orf25Q5T742 122 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 PXDC1Q5TGL8 231 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CCDC30Q5VVM6 783 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 RHPN2Q8IUC4 686 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 VPS52Q8N1B4 723 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 SLC2A12Q8TD20 617 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ZFPM2Q8WW38 1151 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 PIGKQ92643 395 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ZBTB10Q96DT7 871 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 RNF125Q96EQ8 232 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 HDHD5Q9BXW7 423 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 AGXT2Q9BYV1 514 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 CTDSP1Q9GZU7 261 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 OSBPL5Q9H0X9 879 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 STN1Q9H668 368 aaKnown RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 PREBQ9HCU5 417 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ERVK-5Q9HDB9 667 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 RASSF1Q9NS23 344 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 MTMR4Q9NYA4 1195 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ELOVL5Q9NYP7 299 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 AASSQ9UDR5 926 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 FBXO9Q9UK97 447 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-213ENST00000554776 EMSYQ7Z589 1322 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 ZNF521Q96K83 1311 aa3.43□□□□□ -1.86
SCFD1-213ENST00000554776 B4E171 279 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SEPT4O43236 478 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 DHX16O60231 1041 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TLR2O60603 784 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ENO1P06733 434 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 WEE2P0C1S8 567 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 CTSAP10619 480 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TGM2P21980 687 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 BDNFP23560 247 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ABCD3P28288 659 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 PNPLA4P41247 253 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TSPAN7P41732 249 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 NR4A2P43354 598 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 PCP4P48539 62 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 CCT4P50991 539 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ID2Q02363 134 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ZNF91Q05481 1191 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SRSF1Q07955 248 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 FOXD4Q12950 439 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 MTA1Q13330 715 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 RABEP1Q15276 862 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ANXA2RQ3ZCQ2 193 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SLC9C1Q4G0N8 1177 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 EARS2Q5JPH6 523 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 WDR45BQ5MNZ6 344 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SH2D4BQ5SQS7 431 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ACAD10Q6JQN1 1059 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TMEM88Q6PEY1 159 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SHC4Q6S5L8 630 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SLC22A25Q6T423 547 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 DHRS13Q6UX07 377 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 RTL10Q7L3V2 364 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 RNF144BQ7Z419 303 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 PIP4P1Q86T03 277 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 CHD1LQ86WJ1 897 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 NANOGP1Q8N7R0 232 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 PTGR2Q8N8N7 351 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 Q8N9P0 234 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 SRFBP1Q8NEF9 429 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 OR52N4Q8NGI2 321 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 BCAS4Q8TDM0 211 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 TBC1D22AQ8WUA7 517 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 HDAC2Q92769 488 aaKnown RBP3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ATP2A3Q93084 1043 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 RNFT2Q96EX2 444 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 FCRL4Q96PJ5 515 aa3.42□□□□□ -1.86
SCFD1-213ENST00000554776 ZNF347Q96SE7 839 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms